Gene Sala_1840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1840 
Symbol 
ID4082018 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1934202 
End bp1934720 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content72% 
IMG OID638010215 
ProductGCN5-related N-acetyltransferase 
Protein accessionYP_616885 
Protein GI103487324 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1670] Acetyltransferases, including N-acetylases of ribosomal proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.718832 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CCCTGCTTTC CCTGTCGACC GACCATTGCC GCATCGCGCC GCTGACCGCC 
GACGATGCGC GCGCACTGAC CGCGATCACC GACGAGACGG TGACGTCGCG CGTCCATTTC
CTGCCCGCGC CCTTCACCGA GGCCGACGCC CGCGCGCTGA TCGCGCGGTC GGGCGGCGGC
GACGTGTTCC ACGCGGTGCG CGATCCACGC GGGCTGGAAC TTTATGGTGT CGTCGGCGTG
CATCGCCGCG TCGGTCACGA ATATGAGATC GGTTACTGGT TCGCGGCGCG GGTGCGCGGC
AAAGGCATCG CGACCGAGGC GGTGCGCGCG GTCGTCGCCG CGCTCGCCGC GGCGCAGTCC
GATTGTGCGA TCGTCGCCGA ATGCCACCCC GACAACGAGC GCTCGCGCGC GCTGCTGCGC
CGCGTCGGCT TCGTGTCGAC GGGGCGGCCG GGCAAGCGGC CGGGACGGAT ACTGATGACC
TGGCGCGCGG CGCCGGCCTG GCGCATCGAC GTGTGCTGA
 
Protein sequence
MTDTLLSLST DHCRIAPLTA DDARALTAIT DETVTSRVHF LPAPFTEADA RALIARSGGG 
DVFHAVRDPR GLELYGVVGV HRRVGHEYEI GYWFAARVRG KGIATEAVRA VVAALAAAQS
DCAIVAECHP DNERSRALLR RVGFVSTGRP GKRPGRILMT WRAAPAWRID VC