| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1823 |
|---|
| Symbol | |
|---|
| ID | 4082175 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1921244 |
|---|
| End bp | 1921663 |
|---|
| Gene Length | 420 bp |
|---|
| Protein Length | 139 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010198 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616868 |
|---|
| Protein GI | 103487307 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3824] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.369651 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.171336 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGC GCTCTAGCCT GTCAGCCGGA TGGACCGGCG CCGCCCCCGA CGCCGATGCG
CTGTTCGCGA TGGCCGAAGC GGCGCTGGAA ACCATGCCCG ACGTGTTCAG ACCGCATATC
GAGGGCGTCG TGATTTCGAT CGAGGAGTTC GCTGACGACG AGGTGCTGGC CTCGCTGGGC
ATCGAACATC CCTATGACCT CACCGGACTC TACGAAGGGC GCCCGCTCAC CGAACGCAGC
ATCGGCGAAA GCGGTGGGAT GCCCGACCGG GTGACGCTGT ACCGCATCCC CATCCTGGTC
GAATGGATCG AGGGCGGCGA ACGGCTCGAC TGGCTGGTGC GCCATGTGCT GATCCACGAG
ATCGGCCATC ATTTCGGCTT TTCCGACGAC GATATGCACG CGCTTGAGGA TATGGCGTGA
|
|---|
| Protein sequence | MSSRSSLSAG WTGAAPDADA LFAMAEAALE TMPDVFRPHI EGVVISIEEF ADDEVLASLG
IEHPYDLTGL YEGRPLTERS IGESGGMPDR VTLYRIPILV EWIEGGERLD WLVRHVLIHE
IGHHFGFSDD DMHALEDMA
|
|---|
| |