Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1817 |
Symbol | |
ID | 4082208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1914629 |
End bp | 1917364 |
Gene Length | 2736 bp |
Protein Length | 911 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010192 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_616862 |
Protein GI | 103487301 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.513906 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0849834 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGCTG GCCTTGCCAA GAGCCTGTTC GGCTCGTCCA ACGACCGTTA TGTCAATTCG ATCCGCAAGA TCGTCGAGCG GATCAACGCC TTCGAACCCG CGATGCAGGC GCTCGATGAC GCCGGATTGC AGGGGCAGAC GGCAACCTTC CGCGCGCGGC TGGCCGCGGG CGAAACGCTC GACGACATTC TGCCCGAAGC CTTTGCCACG GTGCGCGAGG CGGCGGTGCG CACATTGGGG ATGCGTCATT TCGACGTCCA GATGATCGGC GGCGTTGTCC TCCACCGCGG CGAGATCGCC GAAATGGCGA CGGGCGAGGG CAAGACGCTG ATGGCGACCC TGCCCTGTTA TCTGAACGCG CTGAGCGGCA AGGGCGTGCA TGTCGTCACC GTCAACGACT ATCTGGCGCG CCGCGACGCC GAATGGATGG GCGCCGTCTA TGGCTTCCTG GGGCTGACCA CCGGCGTGAT CGTCCCGAAC CTCAACGAGA CGCAGCGGCG CGAGGCCTAT AACAGCGACA TCACCTATGC GACGAACAAC GAGCTGGGCT TCGACTATCT GCGCGACAAT ATGAAGTTCG ACCGCGCGCA GATGGTCCAC CGCCCGTTCA ATTTCGGCAT CGTCGACGAG GTCGATTCGA TCCTGATCGA CGAAGCGCGC ACGCCGCTCA TCATCTCCGG GCCGACCGAC GACAAGTCCG AACTCTATAT CCGCGTCAAC GAGGTGGTGC TCCAGCTCAC CGAAGAGGAT TATGAGAAGG ACGAAAAGTC CAAGTCCATC AACCTGACCG AAGAAGGCAC CGAGCATGTC GAGCGGCTGC TCGAAGCCGC GGGGCTGCTC CAGGGCAGCA ACCTTTACGA CATCGAAAAC ACCCAGGTCG TCCATCACGT CAATCAGGCG CTGAAAGCGA TCCAGATGTT CCGCATCGAC ACCGACTATA TCGTCAAGGA CGGCAAGGTC GTCATCATCG ACGAGTTCAC CGGCCGCATG ATGGAGGGGC GCCGCTGGTC CGACGGTCTG CACCAGGCGG TCGAGGCGAA GGAAGGCGTG CAGATCGAGC CCGAGAACCA GACGCTCGCG TCGATCACCT TCCAGAATTA TTTCCGCATG TATCCGAAGC TTTCGGGCAT GACCGGCACC GCGGCGACCG AGGCGGCCGA GTTTTTCGAC ATCTACAAGA TGAACGTCGT CACCATCCCG ACCAATCGCC CGATCGCGCG GATCGACGAA GAGGACGAGT TTTACAAAAA TATCAACGAC AAGTTCGGTG CGATCGCGCG CACGATCCGC GAGGCGCAGG AGCGCGGCCA GCCGGTGCTC GTCGGCACGG TGTCGATCGA GAAGTCCGAG CTGCTCTCCT CCTTCCTCGA AAAGGAAGGC GTCGCGCACA GCGTCCTCAA CGCACGCTTC CACGAGAGCG AAGCGCGTAT CGTCGCGCAG GCGGGACGCA GCGGTGCGGT CACCATCGCG ACCAACATGG CGGGCCGCGG CACCGACATC AAACTGGGCG GCAACGAGGA GTTCCGCATC GAGGATGAGC TCAAGGACAT GCCCGCCGGG CCCGAGCGCG ACGCCGCCGA GGCGCGCATC CGCGAAGAGG TCGCCGCCGA GCGCGAGGCG GTGAAGGCCG CCGGCGGGCT GTTCGTGCTC GCGACCGAGC GCCACGAAAG CCGCCGCATC GACAATCAGC TGCGCGGTCG TTCGGGACGG CAGGGCGACC CCGGCCTCAG CAAATTCTAT CTCTGCCTCG ACGACGACCT GCTGCGCATC TTTGGTCCCG ACACGCTGTT CGCCAAGATG ATGAACAAGA ATCTGGAGGA TGGCGAGGCG ATCGGGTCGA AATGGCTGTC GAAGGCGATC GAGACCGCGC AGAAGAAGGT CGAGGCGCGC AATTACGACA TCCGCAAGCA GGTCGTCGAA TATGACAATG TGATGAACGA CCAGCGCAAG GTCATCTATG AACAGCGCGG CGAGATCATC GACAGCGAGA CCGTCGACGA CGTGATGGCG GCGATGCGCG CCGAAACGGT CAATGCGATC GTCGCCGACG CCTGCCCGCC GGGAAGCTAT CCCGAGCAAT GGAATGTCGA AGGCATGAAG GAGCGTGTGG CGAACATTCT GAACCTGCAT CCGCCTATCG ACGAGTGGAT GCAGGAGGAT GCCGTCGACC CCGAAATGTT CGAGGAGCGG CTGCAGCGGA TGGCCGACGC GACAGCCGCC GAAAAGGCGG CGCTGGTCGA TGCGGAAACC TGGAAGGGCA TCGAAAAGTC GATCCTGCTC CAGACGCTCG ATCACCATTG GAAGGAGCAT CTCGCGACGC TCGACGCGCT TCGGCAGGTG GTGTTCCTGC GCGCCTATGC ACAGAAGCAG CCGATCAACG AATATAAGCA GGAGGCGTTC GCGCTGTTCG AGCGGATGCT GTCGAACATC CGCGAGGATG TGACGCGCAC CGTCGCGCGC ATCGATTTCC AGTTCCAGGA ACCCGAACCG ATGCCGCTGC CCGAGCTTCC CGATTTCCTG ACGACGCACA TCGACCCCTT CACCGGCGAG GACAACAGCG CCGACGTCGA TGCGGGGTCG CTGGGGGTGA TCGCCGACAC GCTGCCCCCG ATGCAGGTGC CCAAGCACGA CATCGCCAGG GGCGAGAACC CCTATGCGGC GATGGAGATC AGTCGCAACG CGCCGTGCCC GTGCGGGTCG GGGCGCAAAT ACAAGCATTG CCACGGGGCG ATTTGA
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Protein sequence | MFAGLAKSLF GSSNDRYVNS IRKIVERINA FEPAMQALDD AGLQGQTATF RARLAAGETL DDILPEAFAT VREAAVRTLG MRHFDVQMIG GVVLHRGEIA EMATGEGKTL MATLPCYLNA LSGKGVHVVT VNDYLARRDA EWMGAVYGFL GLTTGVIVPN LNETQRREAY NSDITYATNN ELGFDYLRDN MKFDRAQMVH RPFNFGIVDE VDSILIDEAR TPLIISGPTD DKSELYIRVN EVVLQLTEED YEKDEKSKSI NLTEEGTEHV ERLLEAAGLL QGSNLYDIEN TQVVHHVNQA LKAIQMFRID TDYIVKDGKV VIIDEFTGRM MEGRRWSDGL HQAVEAKEGV QIEPENQTLA SITFQNYFRM YPKLSGMTGT AATEAAEFFD IYKMNVVTIP TNRPIARIDE EDEFYKNIND KFGAIARTIR EAQERGQPVL VGTVSIEKSE LLSSFLEKEG VAHSVLNARF HESEARIVAQ AGRSGAVTIA TNMAGRGTDI KLGGNEEFRI EDELKDMPAG PERDAAEARI REEVAAEREA VKAAGGLFVL ATERHESRRI DNQLRGRSGR QGDPGLSKFY LCLDDDLLRI FGPDTLFAKM MNKNLEDGEA IGSKWLSKAI ETAQKKVEAR NYDIRKQVVE YDNVMNDQRK VIYEQRGEII DSETVDDVMA AMRAETVNAI VADACPPGSY PEQWNVEGMK ERVANILNLH PPIDEWMQED AVDPEMFEER LQRMADATAA EKAALVDAET WKGIEKSILL QTLDHHWKEH LATLDALRQV VFLRAYAQKQ PINEYKQEAF ALFERMLSNI REDVTRTVAR IDFQFQEPEP MPLPELPDFL TTHIDPFTGE DNSADVDAGS LGVIADTLPP MQVPKHDIAR GENPYAAMEI SRNAPCPCGS GRKYKHCHGA I
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