| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1812 |
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| Symbol | |
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| ID | 4082203 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1910025 |
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| End bp | 1910756 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638010187 |
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| Product | 20S proteasome, A and B subunits |
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| Protein accession | YP_616857 |
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| Protein GI | 103487296 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3484] Predicted proteasome-type protease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.407746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTATT GCGTGGGAAT GCGGCTCAAC AAGGGGCTGG TGTTCATGTC GGACACCCGC
ACCAATGCCG GCGTCGACGA TATTTCGCAG GTGCGCAAGA TGCGCAGCTG GCACGTGCCG
GGCGAGCGCG TCATCACGCT GATGTCGGCG GGCAATCTGG CGACAACGCA GGCGGTCGTC
AGCCTGCTCG ACGAGCGCAC CAAGGCGCCC GAGGACCGGC ACCCGTCGAT CCTCGAAGCG
CCATCGATGT TCGTGGTGGC CACGATCATC GGCGAAACGC TGCGCAGCGT CGTGATGCGC
CACAATGACG AGGGCCCCGC CGCGGAGTCG CTGTTCCGTG CCTCGCTGAT CGTCGGCGGC
CAGATCAAGG GCGCCGAACC ACGGCTGTTC CTCATCTATC CCGAGGGCAA TTTCATCGAG
GCGGGCGAGG ACAATCCCTT TTTCCAGATC GGCGAGACCA AATATGGCCG CCCGATCATC
GTGCGCTCCT ATGATCCCGC CATGTCGTTC GAGGATGCGG TAAAGCTGCT CTGCGTGTCC
TTCGATTCGA CGATCCGCGC GAACGCGGGG GTCGACCTGC CGATCGACCT CAAGATCCAC
GAGCGCGACG ATTTCACGAC CGTGCGCGAA CGCCGCTTCG AGCGCGACGA TCCCTATTTC
CGCCGCGTGT CGGAAGGCTG GGCCGAGGCG CTGGGGATCG CCCTGGCGGA ACTGCCGGAT
TTCCGGTTCT GA
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| Protein sequence | MTYCVGMRLN KGLVFMSDTR TNAGVDDISQ VRKMRSWHVP GERVITLMSA GNLATTQAVV
SLLDERTKAP EDRHPSILEA PSMFVVATII GETLRSVVMR HNDEGPAAES LFRASLIVGG
QIKGAEPRLF LIYPEGNFIE AGEDNPFFQI GETKYGRPII VRSYDPAMSF EDAVKLLCVS
FDSTIRANAG VDLPIDLKIH ERDDFTTVRE RRFERDDPYF RRVSEGWAEA LGIALAELPD
FRF
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