| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1811 |
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| Symbol | |
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| ID | 4082202 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1907951 |
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| End bp | 1909915 |
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| Gene Length | 1965 bp |
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| Protein Length | 654 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638010186 |
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| Product | acetate--CoA ligase |
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| Protein accession | YP_616856 |
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| Protein GI | 103487295 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR02188] acetate--CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.573695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.931024 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGACC TACCCCCCTC CGAACCCATG GTCCCCGTCC CCGCCGACGC CGCCGCCAAC
ACGCATTGCA GCGCTGCCGA CTATGACCGC CTCTATGCCG CGAGCATCGC CGACCCCGAC
GCCTTCTGGG CCGAGCAGGC GAAACGGCTC GACTGGATCA AGGCGCCGAC CAGGATCGCG
GGCTGGTCCT ATGACCCGGT GAGCATCAAA TGGTATGAGG ACGGCGTTCT CAACCTCTGC
CACAACGCCG TCGACCGCCA TGTCGCCGCC GACCACGGCG ACCGCACCGC GATCATTTTC
GAGCCCGACG CGCCCGACGG CGAAACGCGG CATATCAGCT ATGCCGCGCT GCTCGCCGAC
GTCGTTCGCT TCGCGAACAC GCTCAAGAAA ATGGGCGTGC GGAAGGGCGA CCGCGTCACC
ATCTATATGC CGATGATCCC CGAGGGCGCG GTGGCGATGC TCGCCTGCGC GCGCATCGGC
GCGGTGCACA GCGTCGTCTT CGGCGGCTTC TCCCCCGAAG CGATCCACGG CCGTATCGAG
GATTGCGGCA GCGACTGGGT GATCTGCGCC GACGAGGGGC TGCGCGGCGG TAAGACCGTG
CCGCTGAAAG CCAATGTCGA CAAGGCGCTC GAACGAATCG CGGTCAGGGG TGTGCTCGTC
ATCGCGCACA CCGGCGGCGA GGTGAACATG ACCGAAGGGC GCGACCATTG GTATGATGCG
CTCTCGGCCG ACGTGTCCGC CGATTGCCCC TGCGAGCCGA TGGGCGCCGA AGACCCGCTC
TTCATCCTCT ATACCTCGGG ATCGACGGGC AAGCCCAAGG GTGTGCTCCA CACCGTCGGC
GGTTACAGCG TCTGGACGGC GACGACCTTC TGGTACGGTT TCGACTATCG GCCGGGCGAG
ATTTTCTGGT GCAGCGCCGA CATCGGCTGG GTCACCGGCC ACAGCTATGT CGTTTACGGT
CCGCTCCAGA ATGGCGCGAC GACCCTGATG TTCGAGGGCG TCCCCAATTA TCCCGACCAT
GACCGCTTCT GGCAGGTCGT CGACAAGCAT GGCGTCAACA TCCTCTACAC CGCACCGACC
GCAATCCGCG CGCTGATGCG CGAGGGCGAC GATTATGTCA CGCGGCACGA CCTGTCGTCG
CTCCGCCTGC TCGGCAGCGT CGGCGAGCCG ATCAACCCGG AGGCGTGGCG CTGGTATCAC
CAGATTGTCG GCAAGGGCCG CGTCCCCGTC ATCGACACCT GGTGGCAGAC CGAAACCGGC
GGGATCATGA TCACCACCTT GCCCGGCGCG CATCCGATGC AGCCGGGCAG CGCGGGACGC
CCCTTTTTCG GCATCCGTCC GCAGCTCGTC GATGCCGATG GCGCAGTGCT CGTCGACGAA
CAGACCGGCG GCGCGGCGGA GGGCAATCTT TGCATCACCC ACAGCTGGCC GGGACAGGCG
CGCACCGTCT ATGGCGACCA TGACCGGTTC GTGCAGACCT ATTTTTCGAC CTACAAGGGC
AAATATTTCA CCGGCGACGG CTGCCGCCGC GACGCGAGCG GTTATTGGCG GATTACGGGG
CGTGTCGATG ACGTGATCAA TGTGTCGGGG CACCGCATGG GCACCGCCGA GGTCGAAAGC
GCGCTGGTGC TGCACGAGGA TGTGGCGGAG GCGGCGGTCG TCGGCTTTCC GCACGACATC
AAGGGCCAGG GCATTTACGC CTATGTCACG CTCAACGCCG GGGTCGAGCC GGGCGAGGAC
ATCGTCGCGG CGCTCAAACA GCAGGTCCGC AAGGAAATCG GTCCGATCGC GACTCCCGAC
CATATCCACC TGACCCCCGC GCTGCCCAAG ACACGGAGCG GCAAGATCAT GCGGCGGATT
TTGCGCAAGA TTGCCGAAAA CGACTTCGGC TCGCTGGGCG ACACCTCGAC GCTCGCCGAT
CCCGGCCTGG TCGATGGGCT GATCGAGGAG CGGCGGAATC GGTAA
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| Protein sequence | MSDLPPSEPM VPVPADAAAN THCSAADYDR LYAASIADPD AFWAEQAKRL DWIKAPTRIA
GWSYDPVSIK WYEDGVLNLC HNAVDRHVAA DHGDRTAIIF EPDAPDGETR HISYAALLAD
VVRFANTLKK MGVRKGDRVT IYMPMIPEGA VAMLACARIG AVHSVVFGGF SPEAIHGRIE
DCGSDWVICA DEGLRGGKTV PLKANVDKAL ERIAVRGVLV IAHTGGEVNM TEGRDHWYDA
LSADVSADCP CEPMGAEDPL FILYTSGSTG KPKGVLHTVG GYSVWTATTF WYGFDYRPGE
IFWCSADIGW VTGHSYVVYG PLQNGATTLM FEGVPNYPDH DRFWQVVDKH GVNILYTAPT
AIRALMREGD DYVTRHDLSS LRLLGSVGEP INPEAWRWYH QIVGKGRVPV IDTWWQTETG
GIMITTLPGA HPMQPGSAGR PFFGIRPQLV DADGAVLVDE QTGGAAEGNL CITHSWPGQA
RTVYGDHDRF VQTYFSTYKG KYFTGDGCRR DASGYWRITG RVDDVINVSG HRMGTAEVES
ALVLHEDVAE AAVVGFPHDI KGQGIYAYVT LNAGVEPGED IVAALKQQVR KEIGPIATPD
HIHLTPALPK TRSGKIMRRI LRKIAENDFG SLGDTSTLAD PGLVDGLIEE RRNR
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