| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1808 |
|---|
| Symbol | |
|---|
| ID | 4082199 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1903762 |
|---|
| End bp | 1904556 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638010183 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_616853 |
|---|
| Protein GI | 103487292 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACA CCACCATCCT CACCGAACGC CGTGGCCACA TCCTGACCGT CACGATCAAC
CGGCCCGAAG CGCGCAACGC GGTCAACGCC GCGGTCCACG TCGGCATTGG CACCGCGCTC
GAAACTGCGG AAAACGATCC CGAAATCCGC ACGGTCATCA TCACCGGCGC GGGCGACAAA
AGCTTTTGCG CGGGCGCCGA CCTGGTCGCC CTGTCGCGCG GTGAAAGCCT TTATCCCGAC
GATCCGGCGC AGCAGGCGTG GGGGTTTGCC GGCATGGTCG CGCACCCGAT CTCGAAACCG
ATCATCGCCG CGGTCAACGG CTTCGCCTTC GGCGGCGGCT GCGAGATCGC GCTGATGAGC
GACATCATTA TCGCCGCCGA CCATGCGCAG TTCGGGCTTC CCGAGGTCAA GGTCGGGCTG
TTCGCCGCGG CGGGCGGCGC CTTCCGCCTC GCGCAGCAAA TCCCGCGCAA GCTGGCGATG
GAATATCTGC TGACCGGCGA CCCGATCCCC GCCGCGCGCG CCGCCGAGTT CGGCCTCGTC
AACCATGTCG TCCCGCTCGC CGAGCTGATG CCCACCGCGA TCGCGCTCGC CGACAAGATC
GCCGCCAACG CGCCACTCTC GGTGCAGGCG TCGAAGCGCG TCGCGCTGGG CATCCAGGAC
GGCCGCATCG CCGCCGACGC GCCCTATTGG GAGCATAACA CCCTCGAGCG CAGCGCGCTG
ATGCGCAGCG AGGACGCGCG CGAAGGCCCG CGCGCCTTTG CGGAAAAGCG CAAGCCCGAA
TGGAAAGCGC GCTAG
|
|---|
| Protein sequence | MTDTTILTER RGHILTVTIN RPEARNAVNA AVHVGIGTAL ETAENDPEIR TVIITGAGDK
SFCAGADLVA LSRGESLYPD DPAQQAWGFA GMVAHPISKP IIAAVNGFAF GGGCEIALMS
DIIIAADHAQ FGLPEVKVGL FAAAGGAFRL AQQIPRKLAM EYLLTGDPIP AARAAEFGLV
NHVVPLAELM PTAIALADKI AANAPLSVQA SKRVALGIQD GRIAADAPYW EHNTLERSAL
MRSEDAREGP RAFAEKRKPE WKAR
|
|---|
| |