Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1806 |
Symbol | |
ID | 4082197 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1901348 |
End bp | 1902709 |
Gene Length | 1362 bp |
Protein Length | 453 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010181 |
Product | DNA repair protein RadA |
Protein accession | YP_616851 |
Protein GI | 103487290 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1066] Predicted ATP-dependent serine protease |
TIGRFAM ID | [TIGR00416] DNA repair protein RadA |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.75981 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAAAG CGAAACGTCA ATATGTCTGC CAGAATTGCG GCTCCGCCAC CTATCGCTGG CAGGGGCAGT GCGCCGACTG CGGCGAGTGG AACACGCTGG TCGAGGAGGC CGCCGAAACC GTCTTTTCGG CCAAGCACAA CCTGAGCAAA GGCGGACGGA CGATCCCGCT CGAAACGCTG AATGCCGAAA GCAGGATGCC CGAGCGGATG CTGTGCGGCA TCGCCGAGTT CGACCGCGCA CTGGGCGGCG GCTTCGTCGC GGGGTCGGCG ACCTTGATCG GCGGCGATCC GGGGATCGGC AAATCGACCT TGCTGTTGCA GGCCGCGGGA CGGCTCGCCA AGGCGGGCAG GTCGGTCGTC TATATCAGCG GCGAGGAGGC GGCGGCGCAG GTGCGATTGC GCGCGCAGCG GCTGGGGCTC GGCGACGCGC CGGTCGCACT CGCCAGCGCG ACATCGGTGC GCGACATCCT TGCGACGCTC GGCAGCCGGA CCGCCGATTT CGTCGTGATC GATTCGATCC AGACGATGCA CAGCGACCTG ATCGACAGCG CGCCGGGGAC GGTGAGCCAG GTCCGCGCGA GCGCGCAGGA GCTGATCCGC TATGCCAAGG ACAGCGGCGC GGCGATCGTG CTGGTCGGGC ATGTCACCAA GGACGGCACG ATCGCCGGGC CGCGCGTGCT CGAACATATG GTCGACACGG TGCTGGCGTT CGAGGGTGAG CGCAGCCATC AATATCGCAT CCTGCGCGCG GTCAAGAACC GCTTTGGCGG CACCGACGAG ATCGGCGTGT TCGCGATGGG CGAGGAAGGG CTGGGCGAGG TATCGAACCC GTCGAGCCTG TTCCTGACCG ACCGCAGCCG CGACGTGCCG GGATCGGTGG TGTTCCCCGC GCTGGAAGGC ACGCGGCCGG TGCTCGTCGA GGTGCAGGCG CTGACCGTGC GCCTCGCGAG CGGCGCAACG CCGCGGCGGG CCGTTGTCGG ATGGGACAGC GGGCGGCTCG CGATGGTGCT CGCGGTGCTG GAGGCGCGCT GCGGGCTGCA AATGGGCGCG GCCGAAGTCT ATCTCAATAT CGCCGGCGGA TACCGGCTGA CCGATCCCGC CGCCGACCTT GCGGTTGCCA CGGCGCTGGT TTCGGCGTTC AGCGAGCGGC CGGTGCCCCC CGATGCGATC GTCTTCGGCG AACTGTCGCT GTCGGGCGAA GTGCGCCCGG TATCGCACGA TGCGCTACGT TTGCGCGAAG CAGCAAAGCT CGGTTTTTCA ACGGCCTGGG GTCCAAATGG CATGAAGCGC GTGAACGGCA TCGGCGTCAC CGGCTTTGCC CGGCTCGGCG AACTCGTTGA CCTGATGCTC GGTCGCGACT AG
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Protein sequence | MAKAKRQYVC QNCGSATYRW QGQCADCGEW NTLVEEAAET VFSAKHNLSK GGRTIPLETL NAESRMPERM LCGIAEFDRA LGGGFVAGSA TLIGGDPGIG KSTLLLQAAG RLAKAGRSVV YISGEEAAAQ VRLRAQRLGL GDAPVALASA TSVRDILATL GSRTADFVVI DSIQTMHSDL IDSAPGTVSQ VRASAQELIR YAKDSGAAIV LVGHVTKDGT IAGPRVLEHM VDTVLAFEGE RSHQYRILRA VKNRFGGTDE IGVFAMGEEG LGEVSNPSSL FLTDRSRDVP GSVVFPALEG TRPVLVEVQA LTVRLASGAT PRRAVVGWDS GRLAMVLAVL EARCGLQMGA AEVYLNIAGG YRLTDPAADL AVATALVSAF SERPVPPDAI VFGELSLSGE VRPVSHDALR LREAAKLGFS TAWGPNGMKR VNGIGVTGFA RLGELVDLML GRD
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