| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1797 |
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| Symbol | |
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| ID | 4082265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1892986 |
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| End bp | 1893897 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010172 |
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| Product | phage integrase |
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| Protein accession | YP_616842 |
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| Protein GI | 103487281 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.742134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCTGACG CGGCCTCAAT AGACCGCTTT CTGGAGATGA TGGCGGCCGA GCGCGGTGCT
TCCCGCAACA CGCTCACTGC CTATCGCCGC GATCTGGAGC AGGCGGCCGA GCGGGTCAAA
GGGCCGCTGG GTGCGGCCGA TGCGGCGGCG CTGCGCCAAT TGATGGCCGA TTATCGCTCG
CTGTCCGCGA GCAGCGCGGC GCGCAAGCTG TCGGCGCTGC GACAATTTTT TGCCTTCCTC
CTCGACGAAG GCGAACGCGC GGACAATCCG GCGCTCGACA TCGCGCGTCC GGCGACGCGG
CGCCCATTGC CGCGCATTCT GACTCACGAC GAGATCCGGC GTTTGTTCGA ACAGGCGGTC
GCCGAAGCCG AAGGCGAAGC GCCGCCCGCG GGTGCGGTGC GGATGCTGCT GCTCCTCGAA
CTCCTTTATG GATCGGGGCT GCGCGCGACC GAGCTGGTGT CGCTGCCGCG GCGCGCGGTG
CTTCGCGAGC GCGAATATCT GATCGTCCGC GGCAAGGGCG ACAAGGAACG TCTGGTGCCG
CTTTCGGCCC GCGCACGCGC GGCGTTCGAT CGCTGGCTGC CGCTGCTCGC CGACGGATCG
CCATGGCTTT TCCCCTCCGG CAAGGCGCAT ATCTCGCGGG TGCGGCTGTT TCAGATGCTG
CGCGATCTTG CGGCGCGCGC AGGCGTCGAT CCGGCTGCGG TCAGCCCGCA CGTCCTGCGC
CACGCCTTTG CGACACACCT GCTCGAAGGC GGGGCCGACC TGCGCGCGCT GCAACTCATG
CTCGGCCATG CCGACATTGC AACGACCGAG ATTTACACGC ATGTCGACAG CCGCCGCCTC
GTCGAACTGG TCAACCGGCG GCACCCGCTG GCGCATATGG ATGACGTTGA CCTGACGGCG
CCTTCGGCCT AG
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| Protein sequence | MSDAASIDRF LEMMAAERGA SRNTLTAYRR DLEQAAERVK GPLGAADAAA LRQLMADYRS
LSASSAARKL SALRQFFAFL LDEGERADNP ALDIARPATR RPLPRILTHD EIRRLFEQAV
AEAEGEAPPA GAVRMLLLLE LLYGSGLRAT ELVSLPRRAV LREREYLIVR GKGDKERLVP
LSARARAAFD RWLPLLADGS PWLFPSGKAH ISRVRLFQML RDLAARAGVD PAAVSPHVLR
HAFATHLLEG GADLRALQLM LGHADIATTE IYTHVDSRRL VELVNRRHPL AHMDDVDLTA
PSA
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