Gene Sala_1796 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1796 
Symbol 
ID4082264 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1892029 
End bp1892976 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content65% 
IMG OID638010171 
Productacetyl-CoA carboxylase carboxyltransferase subunit alpha 
Protein accessionYP_616841 
Protein GI103487280 
COG category[I] Lipid transport and metabolism 
COG ID[COG0825] Acetyl-CoA carboxylase alpha subunit 
TIGRFAM ID[TIGR00513] acetyl-CoA carboxylase, carboxyl transferase, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.260488 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.725332 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCT TTCTGGACTT CGAAAAACAG GTCGCCGCAC TCGATCGACA GATTGCCGAA 
CTGCGCGAAA TGGGGGATGA TCCCACGCTC GATATCGAGG GCGACATCGC CAGGCTGGAG
GACAAGTCCG CCAAATTGCT GCGCGACATC TATGCCAGGC TGACGCCGTG GCAGAAAACG
CAGGTCGCGC GTCACCCCGA CCGGCCGCAT TTCAAACATT ATGTCGCGGG CCTGTTCGAC
GACTGGATGC CGCTCGCGGG CGACCGCAAT TTTGCCGACG ATCAGGCGAT TCTGGGCGGG
CTGGCGCGGT TCCGGGGCCG CCGCGTGATG GTGATCGGCC ATGAAAAGGG CGACGATATT
CCGTCGCGGA TGAAGCATAA TTTCGGCATG GCAAAGCCCG AAGGCTATCG AAAGGCGATC
CGGCTGATGC AGCTTGCCGA CCGCTTCGGC CTGCCCGTGA TAACGCTGGT CGATACGTCG
GGCGCCTTTC CCGGCATCCA GGCCGAGGAG CGCGGACAGG CCGAAGCGAT CGCGCGGTCG
ACCGAACAGT GCCTTGCACT GGGCGTGCCG ATGGTCGCGG CGGTGGTCGG CGAGGGCGGT
TCGGGCGGCG CGATCGCGCT CGCCGCGGCA AACCGCGTGC TGATGTTCGA GCACGCCGTC
TATTCGGTGA TCTCTCCCGA GGGTTGCGCC TCGATCCTGT GGCGCACCTC GGACAAGGCG
GCGGAGGCGG CGGCAGCGAT GAAGATGTCG GCGCAGGATC TGCTGGCGCT GAAGATCATC
GACCGGATCG TTCCCGAACC CGTCGGCGGC GCGCATCGCG CGCCCGAGGC TGCGATTGCC
GCGCTCGGCG ATGCCCTCGA ACAGGAACTG AACGGCCTGT CGGGCCTGCC GCGCGACACA
TTGCTTGCCG CGCGAGAGGA AAAGTTCCTC GCGATGGGCC GCGCCTGA
 
Protein sequence
MTAFLDFEKQ VAALDRQIAE LREMGDDPTL DIEGDIARLE DKSAKLLRDI YARLTPWQKT 
QVARHPDRPH FKHYVAGLFD DWMPLAGDRN FADDQAILGG LARFRGRRVM VIGHEKGDDI
PSRMKHNFGM AKPEGYRKAI RLMQLADRFG LPVITLVDTS GAFPGIQAEE RGQAEAIARS
TEQCLALGVP MVAAVVGEGG SGGAIALAAA NRVLMFEHAV YSVISPEGCA SILWRTSDKA
AEAAAAMKMS AQDLLALKII DRIVPEPVGG AHRAPEAAIA ALGDALEQEL NGLSGLPRDT
LLAAREEKFL AMGRA