Gene Sala_1789 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1789 
Symbol 
ID4082257 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1886805 
End bp1887284 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content67% 
IMG OID638010164 
Producthypothetical protein 
Protein accessionYP_616834 
Protein GI103487273 
COG category[S] Function unknown 
COG ID[COG5319] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0266683 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGTTT TTGATCTTTG CTGTGCCGCG GGCGATCACC GGTTCGAGGC CTGGTTCGCG 
AGCAGCGACA GCTTTGCCGA CCAGCAGGCG CGCGGCCTCA TCGCTTGTCC GGTCTGCGGT
GACAGCGACG TCAGCAAGGC GGTGATGGCG CCGCGCGTGG GTGCGAAATC GAACCAGAAG
ACGGAGAGGC ACGCTGTCGC GGCGCGGCCT GCTCCGCTGC CCGCCAATGG ATCGCTGCCG
GTCGAACTCG TGCGCCGGGT GATCGCCGAA ATCGCCGCCA AGCAGGCTGA AATGCTGCCG
CAATCGCGCT GGGTTGGTCG CGATTTCGCG GCCACGGCGC GGGCAATGCA CGACGGGCGC
GTGGCGGAGA AGCTGATCCA CGGCCAGGTT TCGCGCGACG AAGCCGAGGC GCTGCGCGAG
GACGGGATCG CTGCGATGCC GTTGCTCGTT CCCTTCGCGC CGCCCGATGC TGTCAATTGA
 
Protein sequence
MIVFDLCCAA GDHRFEAWFA SSDSFADQQA RGLIACPVCG DSDVSKAVMA PRVGAKSNQK 
TERHAVAARP APLPANGSLP VELVRRVIAE IAAKQAEMLP QSRWVGRDFA ATARAMHDGR
VAEKLIHGQV SRDEAEALRE DGIAAMPLLV PFAPPDAVN