| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1780 |
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| Symbol | |
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| ID | 4082092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1876468 |
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| End bp | 1877418 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638010154 |
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| Product | integrase catalytic subunit |
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| Protein accession | YP_616825 |
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| Protein GI | 103487264 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0228632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.851382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACAGA TTTTACACGG GAGCGCCAAG ACCACGCACG CCATTCGAGG CGAGCTACAG
CGATCGCAAG CTTCGGTCGC GAGCCTCGCG AGGAAGTACG GGATCAACGA GAAGACCGTC
TTGAAGTGGC GCCATCGGCA GTCTGTGGAC GACATGCCGA TGGGGCCGAA GGAGCGCCGC
AGCACCGTCC TCTCGCCTAT GGAAGAAGCT GCCATCGTGG CGTTGCGGGT TCAGGCGCGG
TTGCCGCTCG ACGACGTCTA CATCGCGCTA AAGGACGTGA TCCCGCAGTT GACGCGCTCG
TCGCTGCATC GCTGCCTGCA ACGGCATGGC ATCAGCCGCC TGCCCAAAGC GGACCGCGAG
AAGCCGAAGA AGTTCAAGGA TTATGAGATC GGCTACTTCC ACATCGACAT CGCCGAGCTA
CGCTATGAGG GCGGCAAGGC CTTCCTCTAT GTGGCGGTGG ACCGCACCTC GAAGCTGGTC
TTCGCCCGCA TCTATCGCAA GGCCACAAAG CTTGCCGCCG CAGCTTTCCT CAAGGTGCTG
GTCAAGACCG TGCCTTACAG GATCCACACC GTGCTGACCG ACAATGGCGT CCAGTTCGTC
CAGCCCCAGC GCGGCCAGAG CCGGCAATGG CTGATCCACA TCTTCGAGCG GGTCTGCCTC
GAAAACGGCA TCGAGCATCG GCTGACCAAG CCCTACCACC CATGGACCAA TGGTCAAGCC
GAGCGGATGG TCCGAACCAT CAAGGAAGCG ACCGTCAAAT CCTTCCATTA TGCCTCGATC
CAGGAACTGC GACGACACGT CAGCGACTGG CTGATCGCCT ACAACTTCGC CAAGCAGCTC
AAGGCTCTCA AGTTCAGGAC ACCATATGAA GCCATCGAGG AACTCTGGAA ATCAAAGCCC
GATGTCTTTA TCGTCAAACC CAACCATCAC ATGCTGGGAC CAAACACCTA G
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| Protein sequence | MGQILHGSAK TTHAIRGELQ RSQASVASLA RKYGINEKTV LKWRHRQSVD DMPMGPKERR
STVLSPMEEA AIVALRVQAR LPLDDVYIAL KDVIPQLTRS SLHRCLQRHG ISRLPKADRE
KPKKFKDYEI GYFHIDIAEL RYEGGKAFLY VAVDRTSKLV FARIYRKATK LAAAAFLKVL
VKTVPYRIHT VLTDNGVQFV QPQRGQSRQW LIHIFERVCL ENGIEHRLTK PYHPWTNGQA
ERMVRTIKEA TVKSFHYASI QELRRHVSDW LIAYNFAKQL KALKFRTPYE AIEELWKSKP
DVFIVKPNHH MLGPNT
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