Gene Sala_1749 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1749 
Symbol 
ID4081984 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1841266 
End bp1842057 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content65% 
IMG OID638010124 
Producthypothetical protein 
Protein accessionYP_616795 
Protein GI103487234 
COG category[S] Function unknown 
COG ID[COG2326] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.462127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.41574 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCT CGCTTTCCGA CTATGAAACC GGCGCCCGAT ATGACGGCGA TTATGCCGCG 
GCGCTCGCTG CGCTCGACGA GCGGCTCGAA CGGCTTCAGG CCGCGCACAT CGTCCATGCG
CAGCGCAGCG TGATCATGGT CGAGGGCTGG GACGCCGCGG GGAAGGGCGG GATCATCCGG
CGACTCACCG CCTCGCTCGA CCCGCGCTAT TTCGAGGTGT GGCCGATCGG CGCGCCGACC
GACGAGGAAA AGGCGCGGCA CTTCCTCTGG CGCTTCTGGA AACGCCTGCC GGGCAAACGC
GAAATCTCGA TCTTCGACCG CAGCTGGTAC GGCCGCGTGC TCGTCGAGCG GGTCGAGGGG
TTCGCGACCG AGGCCGAATG GCGCAAGGCC TATGACGAGA TCAACGAGTT CGAGGCGCAA
TTGACGGGCA GCGCGACGCA CCTCGTCAAG CTGTTCGTCC ATGTGACGCA GGAGGAACAG
GACAAGCGTT TCGCCGACCG GCTCGATCAT CCGTGGAAGC GGTGGAAGAC CGGGGCCGAG
GATTATCGCA ACCGGGCGAA GCGCGCCGAC TATCTGGCGG CGATGGACGA CATGTTCGCC
TTGACGCACA CGCGCTGGGC GCCGTGGAAA GTCATCGACG GCAACAACAA GAAAGCGGCG
CGCATCGCTG CGCTGACGCA TATTGTCGAA ACGCTGGAGG CCGCGGTGCC GATGACGCCG
CCCGAACGCG ACCCCGCGGT GGTGAAACTT GCGGCCAAGG CGTTCGGTTA CAAGCCAATG
AATGGGTTCT GA
 
Protein sequence
MTISLSDYET GARYDGDYAA ALAALDERLE RLQAAHIVHA QRSVIMVEGW DAAGKGGIIR 
RLTASLDPRY FEVWPIGAPT DEEKARHFLW RFWKRLPGKR EISIFDRSWY GRVLVERVEG
FATEAEWRKA YDEINEFEAQ LTGSATHLVK LFVHVTQEEQ DKRFADRLDH PWKRWKTGAE
DYRNRAKRAD YLAAMDDMFA LTHTRWAPWK VIDGNNKKAA RIAALTHIVE TLEAAVPMTP
PERDPAVVKL AAKAFGYKPM NGF