| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1743 |
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| Symbol | |
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| ID | 4081978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1836030 |
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| End bp | 1836932 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010118 |
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| Product | RNA polymerase factor sigma-32 |
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| Protein accession | YP_616789 |
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| Protein GI | 103487228 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02392] alternative sigma factor RpoH
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0213426 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0854936 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTAACA AAAGCAATGT TCCGGCCGTG GTCCCAGCGC TTGGCGGCGA AGCCAGCCTG
AACCGCTATC TGGCCGAAAT TCGCAAATTC CCCCTTCTGA CGCCCGAGCA GGAATATATG
CTCGCCAAGC GCTTTCAGGA ACATGGCGAC AATGAAGCGG CGGCGCAGCT CGTCACCTCG
CACCTCCGCC TCGTCGCCAA GATCGCGATG GGCTATCGCG GCTATGGCCT GCCCGTCAGC
GAACTGATCA GCGAAGGCAA TATCGGCCTG ATGCAGGGGG TGAAGAAATT CGACCCCGAA
CGCGGCTTCC GCCTTGCCAC CTATGCGATG TGGTGGATTC GCGCGTCGAT CCAGGAGTTC
ATCCTTCGCT CGTGGAGCCT CGTCAAAATG GGCACGACGG CGGCGCAGAA AAAGCTGTTC
TTCAATCTCC GCCGGATGAA GAACAACCTC GAAGCGTTCG AGGACGGCGA CCTCAGCCCC
GAACATGTCG CCAAGATCGC GACCGACCTT GGCGTGACCG AGGACGAGGT GGTCAGCATG
AACCGCCGCA TGGCGATGGG CGGCGACACC TCGCTCAACG TCCCGATGGG CGAGGATGGC
GACAGCCAGT GGCAGGATCT GCTGGGCGAC GACGGCCCGT TGCAGGACGA GCGTGTCGCC
GAGGCGCAGG AGCGCGACGT GCGGCACGAC CTGCTGACCG AAGCGCTCGA AACGCTCAAC
GAGCGCGAAC GTCACATCCT GACCGAACGC CGCCTGACTG ACGACCCCAA GACGCTCGAG
GATCTGAGCC AGCTTTACGA CGTCAGCCGC GAGCGCGTCC GCCAGATCGA GGTGCGCGCC
TTTGAAAAGC TGCAAAAGGC GATGCTCAAG CTCGCTGGCG ACCGGCGCCT CCTGACTGCC
TGA
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| Protein sequence | MANKSNVPAV VPALGGEASL NRYLAEIRKF PLLTPEQEYM LAKRFQEHGD NEAAAQLVTS
HLRLVAKIAM GYRGYGLPVS ELISEGNIGL MQGVKKFDPE RGFRLATYAM WWIRASIQEF
ILRSWSLVKM GTTAAQKKLF FNLRRMKNNL EAFEDGDLSP EHVAKIATDL GVTEDEVVSM
NRRMAMGGDT SLNVPMGEDG DSQWQDLLGD DGPLQDERVA EAQERDVRHD LLTEALETLN
ERERHILTER RLTDDPKTLE DLSQLYDVSR ERVRQIEVRA FEKLQKAMLK LAGDRRLLTA
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