| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1720 |
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| Symbol | alaS |
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| ID | 4081298 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1809176 |
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| End bp | 1811830 |
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| Gene Length | 2655 bp |
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| Protein Length | 884 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010095 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_616766 |
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| Protein GI | 103487205 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACATCGA CCAACGACAT TCGCCGCTCT TTCCTCGACT ATTTCGGGGG CGCCGGGCAC
CATATCGAAC CGTCGGCGCC GCTGGTGCCC TACAACGACC CGACGCTGAT GTTCGTCAAT
GCGGGCATGG TGCCGTTCAA GAATGTCTTC ACGGGGCTGG AGAAGCGCCC CTACAGCACC
GCCGCTTCGT CGCAGAAATG CGTCCGCGCG GGGGGCAAGC ACAATGATCT CGACAATGTC
GGCTATACCG CGCGGCACCA TACTTTCTTT GAAATGCTGG GCAATTTCTC CTTCGGCGAT
TATTTCAAGG AACAGGCGAT CCACCATGCC TGGACGCTGA TCACCCAGAC ATGGGGACTG
GCGCCGGAGA AGCTGACCGC AACCGTCTAT CACACCGACG ACGAGGCGTT CGACCTGTGG
AAGAAGATCG CCGGCCTGCC CGACGAGCGC ATTATCCGCA TTCCGACGAG CGACAATTTC
TGGTCGATGG GCGATACGGG GCCGTGCGGG CCGTGCAGCG AGATCTTCTA TGACCATGGC
GACCATGTCC GGGGCGGCCC GCCGGGGTCG CCGGAGGAGG ACGGCGACCG CTTCGTCGAA
ATCTGGAACC TGGTGTTCAT GCAATATGAG CAGCTACCGG GCGGCGAGCG CGTCGACCTG
CCGCGGCCGA GTATCGACAC GGGCATGGGG CTGGAACGCG TCGCGGCGGT GCTGCAGGGT
GTCCACGACA ATTATGACAC CGACACCTTC AAGGCGCTGA TCGAGGCGTC GGTGGAGCTG
ACCGGCGTTC GCGCCGACGA AGCGCACCGG GCGAGCCACC GCGTCATCGC CGACCATCTG
CGCGCGTCGA GCTTCCTCGT CGCCGACGGG GTTCTGCCGT CGAACGAGGG GCGCGGCTAT
GTGCTGCGCC GGATCATGCG CCGCGCGATG CGCCACGCGC ATCTGCTGGG TGCGAAGGAT
CCGCTGATGC ACCGGCTGCT GCCGTCGCTG ACCGCCGAGA TGGGCGCCGC CTATCCCGAG
CTGATCCGCG CGCAGCCGCT GATCGCGGAG ACGCTGGAGC GCGAGGAGGT CAAGTTCCGC
CAGACGCTCG ACAAGGGGCT GCGCCTGCTC GACGAGGCGA CGGCGGACAT GGGCAGGGGC
GACACGCTGG TCGGCGACGT CGCGTTCAAG CTCTATGACA CCTATGGTTT CCCCTATGAT
CTGACCGAGG ATGCGCTGCG TTCCAAGGGG ATTTCGGTCG ACCGCGCGGG CTTCGACGCG
GCGATGGCGC AGCAGAAGGC GGCAGCGCGC GCGGCGTGGA AGGGCAGCGG GCAAAAGGCA
TCGGAAGAAA TCTGGTTCGA CCTTGCCGAA ACGCACGGCA GCACCGAGTT TACCGGCTAT
ACCTCGACGT CGGGGGAAGC GACGGTGATC GCGCTGGTCA GGGACGGCCA GCCGGTCGAG
GAAGCCAGGG CGGGCGACGA GGTCATCGTG CTGACCAACC AGACACCCTT CTATGGCGAA
AGCGGCGGCC AGATGGGCGA CGCGGGGATG ATCGCGACGC TGGAAGGCGC AAAGGCCTCG
GTCAGCGACA CCGGCAAGCC GCTCGGCCGC CTGCACACGC ATCAGGCGAA GCTGGAGGCA
GGGACGCTGA AGGTCGGCGA CACGGTGCAG TTGACCGTCG ACGCCGAACG TCGCGACCGC
ATTCGCGCCA ATCACAGCGC GACGCACCTG CTGCACGCGG CGCTCCGCAA CCGGCTGGGC
GGGCATGTGA CGCAGAAGGG CAGCCTGGTC GCCGCCGACC GCTTCCGCTT CGACTTTTCG
CACCCCAAGG CGCTGACCGC GGCGGAAATC GCCGACATCG AGGCGGATGT GAACGCGCAG
ATCCGCGGCA ACGAGCCGGT GACGACGCGG CTGATGACGC CCGACGACGC GATTGCGGCG
GGCGCGCTCG CGCTGTTCGG CGAGAAATAT GGCGACGAGG TGCGCGTGCT CGCCATGGGC
AAGGCCGACG ATCGCAACTA TTCGGTCGAG CTTTGCGGCG GGACGCACGT TCGCGCGCTG
GGGGACATCG CCCTGTTCAA GATCGTCAGC GAAAGCGCGG TCTCTTCGGG CGTGCGGCGC
ATCGAGGCGC TGACCGGCGA AGCGGCGCGG CAATGGCTGA ACGGGCGCGA CGAGGCGCTG
AAGGCGGCGG CGGCGGCACT CAAGACGTCG CCCGACGAGG TGCCGGCGCG TGTCGCGCAG
CTTGCCGAGC AGCTTAAGAA GGCCGAGCGC GAGCTGGCCG ATGCGAAGAA GGCGCTCGCC
CTTGGCGGTT CCGGGGGCGA CGGCGGTGCC GCGGCGGGTC CGGCGGTCGA GCAGGTCGGC
GATGTTGCGT TCCTGGCGCA GGTTGTCGAC GGGCTCGATC CCAAGGAGCT GCGCGGCACG
GTCGATGGCC TCAAGAAGCA GGTCGGCAGC GGCGTCGCGA TGCTGGTTGC GGTCAATGAC
GGGCGCGCCT CGGTCGCGGT CGGCGTGACC GACGACAAGA CGGGGCACCA CAGCGCGGTC
GATCTGGTCA AGGCGGCGGT CGTGGCGCTG GGCGGGCAGG GCGGCGGCGG GCGCCCCGAC
ATGGCGCAGG GCGGCGGCCC GAACGGCGGC GCGGCGAACG ATGCCGTTGC AGCGGTGAAG
GCCGCGCTCG CTTGA
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| Protein sequence | MTSTNDIRRS FLDYFGGAGH HIEPSAPLVP YNDPTLMFVN AGMVPFKNVF TGLEKRPYST
AASSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKEQAIHHA WTLITQTWGL
APEKLTATVY HTDDEAFDLW KKIAGLPDER IIRIPTSDNF WSMGDTGPCG PCSEIFYDHG
DHVRGGPPGS PEEDGDRFVE IWNLVFMQYE QLPGGERVDL PRPSIDTGMG LERVAAVLQG
VHDNYDTDTF KALIEASVEL TGVRADEAHR ASHRVIADHL RASSFLVADG VLPSNEGRGY
VLRRIMRRAM RHAHLLGAKD PLMHRLLPSL TAEMGAAYPE LIRAQPLIAE TLEREEVKFR
QTLDKGLRLL DEATADMGRG DTLVGDVAFK LYDTYGFPYD LTEDALRSKG ISVDRAGFDA
AMAQQKAAAR AAWKGSGQKA SEEIWFDLAE THGSTEFTGY TSTSGEATVI ALVRDGQPVE
EARAGDEVIV LTNQTPFYGE SGGQMGDAGM IATLEGAKAS VSDTGKPLGR LHTHQAKLEA
GTLKVGDTVQ LTVDAERRDR IRANHSATHL LHAALRNRLG GHVTQKGSLV AADRFRFDFS
HPKALTAAEI ADIEADVNAQ IRGNEPVTTR LMTPDDAIAA GALALFGEKY GDEVRVLAMG
KADDRNYSVE LCGGTHVRAL GDIALFKIVS ESAVSSGVRR IEALTGEAAR QWLNGRDEAL
KAAAAALKTS PDEVPARVAQ LAEQLKKAER ELADAKKALA LGGSGGDGGA AAGPAVEQVG
DVAFLAQVVD GLDPKELRGT VDGLKKQVGS GVAMLVAVND GRASVAVGVT DDKTGHHSAV
DLVKAAVVAL GGQGGGGRPD MAQGGGPNGG AANDAVAAVK AALA
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