Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1720 |
Symbol | alaS |
ID | 4081298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1809176 |
End bp | 1811830 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010095 |
Product | alanyl-tRNA synthetase |
Protein accession | YP_616766 |
Protein GI | 103487205 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0013] Alanyl-tRNA synthetase |
TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATCGA CCAACGACAT TCGCCGCTCT TTCCTCGACT ATTTCGGGGG CGCCGGGCAC CATATCGAAC CGTCGGCGCC GCTGGTGCCC TACAACGACC CGACGCTGAT GTTCGTCAAT GCGGGCATGG TGCCGTTCAA GAATGTCTTC ACGGGGCTGG AGAAGCGCCC CTACAGCACC GCCGCTTCGT CGCAGAAATG CGTCCGCGCG GGGGGCAAGC ACAATGATCT CGACAATGTC GGCTATACCG CGCGGCACCA TACTTTCTTT GAAATGCTGG GCAATTTCTC CTTCGGCGAT TATTTCAAGG AACAGGCGAT CCACCATGCC TGGACGCTGA TCACCCAGAC ATGGGGACTG GCGCCGGAGA AGCTGACCGC AACCGTCTAT CACACCGACG ACGAGGCGTT CGACCTGTGG AAGAAGATCG CCGGCCTGCC CGACGAGCGC ATTATCCGCA TTCCGACGAG CGACAATTTC TGGTCGATGG GCGATACGGG GCCGTGCGGG CCGTGCAGCG AGATCTTCTA TGACCATGGC GACCATGTCC GGGGCGGCCC GCCGGGGTCG CCGGAGGAGG ACGGCGACCG CTTCGTCGAA ATCTGGAACC TGGTGTTCAT GCAATATGAG CAGCTACCGG GCGGCGAGCG CGTCGACCTG CCGCGGCCGA GTATCGACAC GGGCATGGGG CTGGAACGCG TCGCGGCGGT GCTGCAGGGT GTCCACGACA ATTATGACAC CGACACCTTC AAGGCGCTGA TCGAGGCGTC GGTGGAGCTG ACCGGCGTTC GCGCCGACGA AGCGCACCGG GCGAGCCACC GCGTCATCGC CGACCATCTG CGCGCGTCGA GCTTCCTCGT CGCCGACGGG GTTCTGCCGT CGAACGAGGG GCGCGGCTAT GTGCTGCGCC GGATCATGCG CCGCGCGATG CGCCACGCGC ATCTGCTGGG TGCGAAGGAT CCGCTGATGC ACCGGCTGCT GCCGTCGCTG ACCGCCGAGA TGGGCGCCGC CTATCCCGAG CTGATCCGCG CGCAGCCGCT GATCGCGGAG ACGCTGGAGC GCGAGGAGGT CAAGTTCCGC CAGACGCTCG ACAAGGGGCT GCGCCTGCTC GACGAGGCGA CGGCGGACAT GGGCAGGGGC GACACGCTGG TCGGCGACGT CGCGTTCAAG CTCTATGACA CCTATGGTTT CCCCTATGAT CTGACCGAGG ATGCGCTGCG TTCCAAGGGG ATTTCGGTCG ACCGCGCGGG CTTCGACGCG GCGATGGCGC AGCAGAAGGC GGCAGCGCGC GCGGCGTGGA AGGGCAGCGG GCAAAAGGCA TCGGAAGAAA TCTGGTTCGA CCTTGCCGAA ACGCACGGCA GCACCGAGTT TACCGGCTAT ACCTCGACGT CGGGGGAAGC GACGGTGATC GCGCTGGTCA GGGACGGCCA GCCGGTCGAG GAAGCCAGGG CGGGCGACGA GGTCATCGTG CTGACCAACC AGACACCCTT CTATGGCGAA AGCGGCGGCC AGATGGGCGA CGCGGGGATG ATCGCGACGC TGGAAGGCGC AAAGGCCTCG GTCAGCGACA CCGGCAAGCC GCTCGGCCGC CTGCACACGC ATCAGGCGAA GCTGGAGGCA GGGACGCTGA AGGTCGGCGA CACGGTGCAG TTGACCGTCG ACGCCGAACG TCGCGACCGC ATTCGCGCCA ATCACAGCGC GACGCACCTG CTGCACGCGG CGCTCCGCAA CCGGCTGGGC GGGCATGTGA CGCAGAAGGG CAGCCTGGTC GCCGCCGACC GCTTCCGCTT CGACTTTTCG CACCCCAAGG CGCTGACCGC GGCGGAAATC GCCGACATCG AGGCGGATGT GAACGCGCAG ATCCGCGGCA ACGAGCCGGT GACGACGCGG CTGATGACGC CCGACGACGC GATTGCGGCG GGCGCGCTCG CGCTGTTCGG CGAGAAATAT GGCGACGAGG TGCGCGTGCT CGCCATGGGC AAGGCCGACG ATCGCAACTA TTCGGTCGAG CTTTGCGGCG GGACGCACGT TCGCGCGCTG GGGGACATCG CCCTGTTCAA GATCGTCAGC GAAAGCGCGG TCTCTTCGGG CGTGCGGCGC ATCGAGGCGC TGACCGGCGA AGCGGCGCGG CAATGGCTGA ACGGGCGCGA CGAGGCGCTG AAGGCGGCGG CGGCGGCACT CAAGACGTCG CCCGACGAGG TGCCGGCGCG TGTCGCGCAG CTTGCCGAGC AGCTTAAGAA GGCCGAGCGC GAGCTGGCCG ATGCGAAGAA GGCGCTCGCC CTTGGCGGTT CCGGGGGCGA CGGCGGTGCC GCGGCGGGTC CGGCGGTCGA GCAGGTCGGC GATGTTGCGT TCCTGGCGCA GGTTGTCGAC GGGCTCGATC CCAAGGAGCT GCGCGGCACG GTCGATGGCC TCAAGAAGCA GGTCGGCAGC GGCGTCGCGA TGCTGGTTGC GGTCAATGAC GGGCGCGCCT CGGTCGCGGT CGGCGTGACC GACGACAAGA CGGGGCACCA CAGCGCGGTC GATCTGGTCA AGGCGGCGGT CGTGGCGCTG GGCGGGCAGG GCGGCGGCGG GCGCCCCGAC ATGGCGCAGG GCGGCGGCCC GAACGGCGGC GCGGCGAACG ATGCCGTTGC AGCGGTGAAG GCCGCGCTCG CTTGA
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Protein sequence | MTSTNDIRRS FLDYFGGAGH HIEPSAPLVP YNDPTLMFVN AGMVPFKNVF TGLEKRPYST AASSQKCVRA GGKHNDLDNV GYTARHHTFF EMLGNFSFGD YFKEQAIHHA WTLITQTWGL APEKLTATVY HTDDEAFDLW KKIAGLPDER IIRIPTSDNF WSMGDTGPCG PCSEIFYDHG DHVRGGPPGS PEEDGDRFVE IWNLVFMQYE QLPGGERVDL PRPSIDTGMG LERVAAVLQG VHDNYDTDTF KALIEASVEL TGVRADEAHR ASHRVIADHL RASSFLVADG VLPSNEGRGY VLRRIMRRAM RHAHLLGAKD PLMHRLLPSL TAEMGAAYPE LIRAQPLIAE TLEREEVKFR QTLDKGLRLL DEATADMGRG DTLVGDVAFK LYDTYGFPYD LTEDALRSKG ISVDRAGFDA AMAQQKAAAR AAWKGSGQKA SEEIWFDLAE THGSTEFTGY TSTSGEATVI ALVRDGQPVE EARAGDEVIV LTNQTPFYGE SGGQMGDAGM IATLEGAKAS VSDTGKPLGR LHTHQAKLEA GTLKVGDTVQ LTVDAERRDR IRANHSATHL LHAALRNRLG GHVTQKGSLV AADRFRFDFS HPKALTAAEI ADIEADVNAQ IRGNEPVTTR LMTPDDAIAA GALALFGEKY GDEVRVLAMG KADDRNYSVE LCGGTHVRAL GDIALFKIVS ESAVSSGVRR IEALTGEAAR QWLNGRDEAL KAAAAALKTS PDEVPARVAQ LAEQLKKAER ELADAKKALA LGGSGGDGGA AAGPAVEQVG DVAFLAQVVD GLDPKELRGT VDGLKKQVGS GVAMLVAVND GRASVAVGVT DDKTGHHSAV DLVKAAVVAL GGQGGGGRPD MAQGGGPNGG AANDAVAAVK AALA
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