Gene Sala_1702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1702 
Symbol 
ID4081105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1792507 
End bp1792812 
Gene Length306 bp 
Protein Length101 aa 
Translation table11 
GC content63% 
IMG OID638010076 
Producthypothetical protein 
Protein accessionYP_616748 
Protein GI103487187 
COG category[S] Function unknown 
COG ID[COG3809] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.14705 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCAAG CCCAAGGCCT GCTGTGCCCG ACCTGCCGCG TAAACCTCGT CATGTCCGAA 
CGGCAGGGGA TCGAGATCGA CTATTGTCCG CAATGCCGCG GCGTCTGGCT CGACCGCGGC
GAGCTCGACA AGATCATCGA GCGCAGCGAA GCCGTCAGTG CGCCCGCCCC CGCCCGTCCG
CAGGCGGCGC CCCCGCCGCC ACAATATCGC GAACCGGACT ATCGCGAGCG CAGCCATGAC
GACCGCTATT ATGGCAAGCC GTACAAGAAG AAGCATAAAA GCTTCCTCAG CGAATTGTTC
GATTGA
 
Protein sequence
MTQAQGLLCP TCRVNLVMSE RQGIEIDYCP QCRGVWLDRG ELDKIIERSE AVSAPAPARP 
QAAPPPPQYR EPDYRERSHD DRYYGKPYKK KHKSFLSELF D