| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1701 |
|---|
| Symbol | rplJ |
|---|
| ID | 4081104 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1791571 |
|---|
| End bp | 1792086 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638010075 |
|---|
| Product | 50S ribosomal protein L10 |
|---|
| Protein accession | YP_616747 |
|---|
| Protein GI | 103487186 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0244] Ribosomal protein L10 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.302531 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATCGTG CTGAAAAGGC CGAAGCCGTA TCCTCGCTGA ATGCTACGCT GTCGAATGCC
GCCTCGGTTG TTATCGTTCG CAACCTGGGC CTTACCGTCG CCCAGTCGAC GGTGCTTCGC
CAGCAGATGC GCGACGCGGG TGCGAACTTC AGGGTCACGA AGAACCGCCT GGCCAAGATC
GCGCTCGATG GCACGTCCTA CACCGGCATC GGCGAGTTGC TGACCGGTCC CACCGCAATC
GCTTCGTCCA CCGACCCGGT GGCCGCTGCG AAGATCGCGG TGGAGTTTGC CAAGACCAAC
GACAAGCTCG AAATCGTTGG CGGCGGCATG GGGGATGTGA TCCTCGACGT GGAAGGCGTG
AAGGCGCTTG CATCGCTGCC GTCGCTTGAC GAGCTGCGCG GCAAGCTTGT CGGCCTGCTC
CAGGCTCCGG CCACCAAGGT CGCCCAGATT GCGGCGGCTC CGGCCGGTCA GCTGGCGCGG
GTCTTTGGCG CCTATGGTGC CAAGGAAGCG GCATAA
|
|---|
| Protein sequence | MDRAEKAEAV SSLNATLSNA ASVVIVRNLG LTVAQSTVLR QQMRDAGANF RVTKNRLAKI
ALDGTSYTGI GELLTGPTAI ASSTDPVAAA KIAVEFAKTN DKLEIVGGGM GDVILDVEGV
KALASLPSLD ELRGKLVGLL QAPATKVAQI AAAPAGQLAR VFGAYGAKEA A
|
|---|
| |