Gene Sala_1690 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1690 
Symbol 
ID4081093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1779730 
End bp1780533 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content67% 
IMG OID638010064 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_616736 
Protein GI103487175 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID[TIGR02017] N-formylglutamate amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTGGC TGCGCGTCCA TCGCGGCGAC GCGCCGCTCG TCATCGCCTT TCCGCACGGC 
GGCACCGAGC TTGCGGGGCT CGACGAGCGG TTCGTGTCGC CCTGGCATGC GCAGATCGAC
ACCGACTGGT GGATCACCGA CCTTTACGCC TTCGCCGCCG ACATGGGCGC GACCCTGGTG
GCGACCGACA TTTCGCGCAG CGTGATCGAC ATGAACCGCG ACCCGTCGGG CGCCTCGCTC
TATCCGGGGC AGGCGACAAC CGAATTGTGT CCGACCACGA CTTTCGACGG CGAGCCGCTT
TACCGTTTCG ACCTGCCCGA CGAGGCGGAG ATCATGCAGC GGCTCAACCT CTATCACCGC
CCCTATCACG AGGCGCTGAC CGCCGAGCTC GACCGGCTGC GGGCGGCCCA TGGCAAAGTC
GTCCTTTACG ACGCCCATTC GATCCGCAGC CACGTCCCGC GCCTGTTCGA CGGCGAACTG
CCGCAGTTCA ACATCGGCAC CAACGGGGGC GCCACCTGCG CGCCCGAACT CGAAACCATC
GCCGCGAACA TCTGTGCGGC GAGCGGCCAC AGCCATGTCG TCAACGGCCG CTTCAAGGGC
GGCTGGACGA CGCGCCACTA TGGCCATCCC GACGAGGGAA CCCATGCGAT CCAGATGGAG
CTGGCCCAGC GCGGCTATAT GGCCGAGCCC GCCGCGATCA CCCACGCCAA CTGGCCCACC
CCCCTCGACC CCAACCCGAC GATCCGGCCC GTGCTGGAGC AGGTGATCGC CGCCACGCTC
GACTTTGCGA AAGGACGACC ATGA
 
Protein sequence
MDWLRVHRGD APLVIAFPHG GTELAGLDER FVSPWHAQID TDWWITDLYA FAADMGATLV 
ATDISRSVID MNRDPSGASL YPGQATTELC PTTTFDGEPL YRFDLPDEAE IMQRLNLYHR
PYHEALTAEL DRLRAAHGKV VLYDAHSIRS HVPRLFDGEL PQFNIGTNGG ATCAPELETI
AANICAASGH SHVVNGRFKG GWTTRHYGHP DEGTHAIQME LAQRGYMAEP AAITHANWPT
PLDPNPTIRP VLEQVIAATL DFAKGRP