Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1689 |
Symbol | |
ID | 4081092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1778201 |
End bp | 1779730 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638010063 |
Product | histidine ammonia-lyase |
Protein accession | YP_616735 |
Protein GI | 103487174 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2986] Histidine ammonia-lyase |
TIGRFAM ID | [TIGR01225] histidine ammonia-lyase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGGTTG TGACGATCAC CCCCGGCGCG ATGAGCTTCG CCGACTGGCG TGCGATTTAC GAAGGCGCGA GTGCCGCGCT GACCGTGGGT GCATGGGATG CGATCGACGC CAGCGCCGCG GCGGTGGCGC GGATCGTCGC CAAGGGCGAT CCCGTCTATG GCATCAACAC CGGCTTTGGA AAGCTCGCGA GCGTGCGGAT CGCGAGCGAC GATCTAGCGA CGCTCCAGCG CAACATCGTG CTCAGCCATG CCGCGGGCAC CGGTGCTCCC TCCCCTACCC CTGTCGTCCG ACTGATGATG GCGCTCAAGC TCGCGAGCTT CGGCGTCGGC GCGTCCGGCG TGCGGCGCGA AACGGCGGCG ATGCTGGAGG CGATGCTCGC GCGGGGGCTG ATCCCGGTCG TGCCGTCGCA GGGTTCAGTC GGCGCGAGCG GCGACCTTGC GCCGCTGGCG CATATGGCCG CGGCGATGAT CGGCGTCGGC AAGATCGACG TCGGCGGCGC GATCATGCCC GCCGCCGAAG CGCTCGCGCA GGCCGAGCTG ACGCCGCTCG AACTTGGCCC GAAGGAAGGA CTCGCGCTGC TCAACGGCAC ACAGTTTTCG ACCGCGAACG CGCTTGCGGG CCTGTTCCGT GCCGAAACCC TGTTCCGCTC GGCGCTGATC ACCGGGGCGC TCTCGACCGA AGCCGCCAAG GGTTCCGACG CGCCCTTCGA CCCCCGCATC CACGCGCTGC GCGGTCATAT CGGCCAGCGC GAGGTCGGCG GCGCGCTCCG CACCCTGATG GCGGGGTCGG CGATCCGCGC CTCGCACGCC ATCGACGATC CGCGCGTGCA GGATCCCTAT TGCCTGCGCT GCCAGCCGCA GGTGATGGGC GCGGTGCTCG ACCTGCTGCG TCAGGCGGGG GCGACGCTCG GCGTGGAGGC GAATGGCGTC TCGGACAATC CGCTGATCTT CGCCGATAGC GACGAAGCCT TGTCGGGCGG CAATTTTCAC GCCGAACCGG TGGCTTTCGC CGCCGATATG ATCGCGATCG CCTTGTGCGA AATCGGCTCG ATCGCCGAGC GCCGCATCGC GATGCTCGTC GATCCCGCGC TGTCGGGCCT GCCTGCCTTC CTGACGCCGC GCCCCGGCCT CAACTCGGGC TTCATGATCC CGCAGGTCAC CGCTGCGGCG CTGGTCAGCG AAAACAAGCA GCGCGCCTAT CCCGCCAGCG TCGATTCGAT CCCGACCTCG GCGAACCAGG AGGATCATGT GTCGATGGCC GCGCACGGCG CGCGCCGCCT GCTCGACATG GCCGACAATG CCAGCGCGGT GATCGGCATC GAACTGCTGG CCGCGTGTCA GGGGATCGAC TTTCACGCGC CGCTCAAATC GAGCGACGCG CTCGAGGCGG CGCACCGGCA TCTGCGCTCG CACGTCCCGA CGCTCGACGA CGACCGGCAT TTCCACCCCG ACATGGAAGC CGCGACGGCA TTGATCCGTT CGGGCAGCCT CGTCGCCGCG GTGCCGGCCA GCCTGCCGGG CGTCGGCTGA
|
Protein sequence | MTVVTITPGA MSFADWRAIY EGASAALTVG AWDAIDASAA AVARIVAKGD PVYGINTGFG KLASVRIASD DLATLQRNIV LSHAAGTGAP SPTPVVRLMM ALKLASFGVG ASGVRRETAA MLEAMLARGL IPVVPSQGSV GASGDLAPLA HMAAAMIGVG KIDVGGAIMP AAEALAQAEL TPLELGPKEG LALLNGTQFS TANALAGLFR AETLFRSALI TGALSTEAAK GSDAPFDPRI HALRGHIGQR EVGGALRTLM AGSAIRASHA IDDPRVQDPY CLRCQPQVMG AVLDLLRQAG ATLGVEANGV SDNPLIFADS DEALSGGNFH AEPVAFAADM IAIALCEIGS IAERRIAMLV DPALSGLPAF LTPRPGLNSG FMIPQVTAAA LVSENKQRAY PASVDSIPTS ANQEDHVSMA AHGARRLLDM ADNASAVIGI ELLAACQGID FHAPLKSSDA LEAAHRHLRS HVPTLDDDRH FHPDMEAATA LIRSGSLVAA VPASLPGVG
|
| |