| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1685 |
|---|
| Symbol | |
|---|
| ID | 4081068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1774222 |
|---|
| End bp | 1774794 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638010059 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616731 |
|---|
| Protein GI | 103487170 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCAGAGT CAAAAACATC CACTTCGGTG GCAGCGCGCC TCGACGCGAT CGAGGCGCAG
ATCAAGCAGA TACTCGAAGC GCTTCACGGA GCGGGCGGAA TGTCCGCACC GTCGACAACG
ATCGAGCTCA CCGGCGAGGA ACTCGACAAG ATCGGCGATG CGCTGGAAGA CCTCGACAGC
CGCCTGACCG ACCGACAGCG GCTCTATTTT CTGGGCATAT TGGGGGCGGC CGCGCACCAT
TTCCAGCAGG TGCTGGCGAC CGAAGGGCCG TCGATCGAGA ATATCCGCAC GATCAAGGTC
GCCAACGCGG CGCGGATCCG CGACGTCAAG CTGTCCGACG CATTCCAGGG GCTTACCAGG
GTCGAGCAGG GCCGACTCGG CAGCATTCTT TCGCCGGGAG GCGACGTGAT GGATTCGGTC
GGAGTGGGCG TTGGCGTTGC CTGCGTCGGG GTCGATTGGT CGAAGGATCT CGCGACCGAC
CAGCTTGGCG GATGGCGCAC GAACCCCGCC TTCGGCGGCG CCGTCGTCAA TCCGGGACCG
CTGGGCGGCC TGCCCGGAGG TTTCGGGCGC TAA
|
|---|
| Protein sequence | MAESKTSTSV AARLDAIEAQ IKQILEALHG AGGMSAPSTT IELTGEELDK IGDALEDLDS
RLTDRQRLYF LGILGAAAHH FQQVLATEGP SIENIRTIKV ANAARIRDVK LSDAFQGLTR
VEQGRLGSIL SPGGDVMDSV GVGVGVACVG VDWSKDLATD QLGGWRTNPA FGGAVVNPGP
LGGLPGGFGR
|
|---|
| |