Gene Sala_1672 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1672 
Symbol 
ID4081055 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1760195 
End bp1761652 
Gene Length1458 bp 
Protein Length485 aa 
Translation table11 
GC content66% 
IMG OID638010046 
Product4Fe-4S ferredoxin, iron-sulfur binding 
Protein accessionYP_616718 
Protein GI103487157 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.987691 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCAGCG CTGAAGATCT GTCCGGCGCT CGCGCACCAC TTTATGCGGC GCGGCGGGGC 
GTTTACCCGA AAGCGGTGAG CGGTCCCTTC CGCCGCTTCA AATGGGCGAT CATGGGGGTC
ACGCTGGCGA TCTATTACGG CACGCCGTGG ATGCGCTGGG ACCGCGGGCC CTATGCCCCC
GACCAGGCGG TGCTCGTCGA CCTCGCCAAC CGGCGCTTCT ATATGTTCCA GATCGAAATC
TGGCCGCACG AGTTTTATTA TGTCGCGGGC CTGCTGATCA TGGCGGGGAT CGGATTGTTC
CTCGTCACCA GCGCGGTCGG GCGCGCCTGG TGCGGCTATG CCTGCCCGCA GACGGTGTGG
ACCGACCTGT TCCAGCATGT CGACCGGCTG GTCGACGGCG ACCGCAATGC GCAAGTCCGC
CTGGCCAATG GTCCATGGAG CTTTGAAAAG ATTTCAAAGC GGACGATCAA ATATCTGATC
TATCTGACCA TCGCTTTCTG GACCGGCGGC GCGTGGATCA TGTATTTCGC CGACGCGCCG
ACGCTGACCC ATGATTTCTG GACGGGGCAG GCGGCGCCGA TCGCCTATGG AACGGTCGCG
GTTCTGACCG CGACCACCTT CATCCTCGGG GGCTTCCTGC GCGAGCAGGT GTGCATCTAT
ATGTGCCCCT GGCCGCGCAT CCAGACCGCG ATGATGGACG AAAAATCGCT GCTGGTGACG
TACAAGGACT GGCGCGGCGA ACCGCGGGGC AGCGTCAAGA AGGCGATGGC GCATCCCGGT
GCGTTCGGCG ACTGCATCGA CTGCAACCAG TGCGTCGCGG TGTGCCCGAC CGGCATAGAC
ATCCGCGAAG GGCCGCAGAT CGGCTGCATC ACCTGTGCGC TGTGCATCGA CGCGTGCGAC
GGCGTGATGG CGCAGGTCGG GCGGCCGCGC GGGCTGATCG ACTATTGCAC GCTCGACGAT
GCCGCGGCCG AAAAGGCGGG CGGGCAGGCG CGGCCGGCGT TGCGGACACT GCTCCGCCCC
CGCACGCTGA TCTACCTCGG CGTATGGAGC GCGATCGGTG CGGCGATGCT CTTTTCGCTG
GGGCAGCGCA CGCGGCTCGA CCTCGCCGTC CAGCATGAGC GCAGCCCGCT CCATGTCCAG
CTTTCGGATG GGCATGTCCG CAACAACTAC ACGCTGAAGC TGCGCAACAT GGAAACGCGA
CCACGCCGGG TCGCGGTGTC GGTGAGCGGG CTGGCCGACG CGGTGCTGTG GACCGAAGGC
GGCACGCGCG AGGGCGCCGG CCGCACCGTT TCGCTGACCC TCGCCCCCGA CAGCGTGACG
CGGGTGCGGT TGTTCATCGC GGCGCCCGGC ACCGGCCCGG CCCGGCAGGA TTTCACGATC
AGCACGCGCG GCCTCGACGG CGATCCGCGC GGCGACAGCG ACATCATCCA GTTCGACCGT
CCGGGGAGTG GACAATGA
 
Protein sequence
MASAEDLSGA RAPLYAARRG VYPKAVSGPF RRFKWAIMGV TLAIYYGTPW MRWDRGPYAP 
DQAVLVDLAN RRFYMFQIEI WPHEFYYVAG LLIMAGIGLF LVTSAVGRAW CGYACPQTVW
TDLFQHVDRL VDGDRNAQVR LANGPWSFEK ISKRTIKYLI YLTIAFWTGG AWIMYFADAP
TLTHDFWTGQ AAPIAYGTVA VLTATTFILG GFLREQVCIY MCPWPRIQTA MMDEKSLLVT
YKDWRGEPRG SVKKAMAHPG AFGDCIDCNQ CVAVCPTGID IREGPQIGCI TCALCIDACD
GVMAQVGRPR GLIDYCTLDD AAAEKAGGQA RPALRTLLRP RTLIYLGVWS AIGAAMLFSL
GQRTRLDLAV QHERSPLHVQ LSDGHVRNNY TLKLRNMETR PRRVAVSVSG LADAVLWTEG
GTREGAGRTV SLTLAPDSVT RVRLFIAAPG TGPARQDFTI STRGLDGDPR GDSDIIQFDR
PGSGQ