Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1671 |
Symbol | |
ID | 4081054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1759728 |
End bp | 1760198 |
Gene Length | 471 bp |
Protein Length | 156 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638010045 |
Product | integral membrane protein linked to a cation pump-like protein |
Protein accession | YP_616717 |
Protein GI | 103487156 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5456] Predicted integral membrane protein linked to a cation pump |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.899771 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGAAA AACGGGCCCG CAAGCCGTTC ACCGGCTGGC ATATGACGGC CATTCTTGTG GCTTTCTTTG CCACCGTCGT CGCGGTCAAT TTCACGATGG CGCGCCTCGC CATGTCGACC TTTGGCGGCA AGGTGGTCGA GAACAGCTAT GTCGCGAGCC AGCAGTACAA CAAGTTGCTT GCACGCGCAG AGGCGCAGGA CCAGCTGGGC TGGACACCGA CGGTCACGCG CGACCCCGAC CGGCGCGTTC GCATCGACAT TCGCAAGGAT GGCGAGCCGC TCGCAGACCT CAGCGTCGGC GCGACGGCCA GCCATCCGCT CGGGCGCACC CCACCTCTCG CGCTTCGTTT CGTCGCCGCG GAGGATGGCG GGTGGCGTTC GGTCGAGCCG CTGGCGGAGG GGCGCCAGCG GCTCGACATC AGGATTTCCA GGGGCACGGA CGAGGCGCGC TACCGGATCG ACCTAAAATG A
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Protein sequence | MTEKRARKPF TGWHMTAILV AFFATVVAVN FTMARLAMST FGGKVVENSY VASQQYNKLL ARAEAQDQLG WTPTVTRDPD RRVRIDIRKD GEPLADLSVG ATASHPLGRT PPLALRFVAA EDGGWRSVEP LAEGRQRLDI RISRGTDEAR YRIDLK
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