Gene Sala_1671 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1671 
Symbol 
ID4081054 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1759728 
End bp1760198 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content66% 
IMG OID638010045 
Productintegral membrane protein linked to a cation pump-like protein 
Protein accessionYP_616717 
Protein GI103487156 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5456] Predicted integral membrane protein linked to a cation pump 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.899771 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGAAA AACGGGCCCG CAAGCCGTTC ACCGGCTGGC ATATGACGGC CATTCTTGTG 
GCTTTCTTTG CCACCGTCGT CGCGGTCAAT TTCACGATGG CGCGCCTCGC CATGTCGACC
TTTGGCGGCA AGGTGGTCGA GAACAGCTAT GTCGCGAGCC AGCAGTACAA CAAGTTGCTT
GCACGCGCAG AGGCGCAGGA CCAGCTGGGC TGGACACCGA CGGTCACGCG CGACCCCGAC
CGGCGCGTTC GCATCGACAT TCGCAAGGAT GGCGAGCCGC TCGCAGACCT CAGCGTCGGC
GCGACGGCCA GCCATCCGCT CGGGCGCACC CCACCTCTCG CGCTTCGTTT CGTCGCCGCG
GAGGATGGCG GGTGGCGTTC GGTCGAGCCG CTGGCGGAGG GGCGCCAGCG GCTCGACATC
AGGATTTCCA GGGGCACGGA CGAGGCGCGC TACCGGATCG ACCTAAAATG A
 
Protein sequence
MTEKRARKPF TGWHMTAILV AFFATVVAVN FTMARLAMST FGGKVVENSY VASQQYNKLL 
ARAEAQDQLG WTPTVTRDPD RRVRIDIRKD GEPLADLSVG ATASHPLGRT PPLALRFVAA
EDGGWRSVEP LAEGRQRLDI RISRGTDEAR YRIDLK