| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1664 |
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| Symbol | |
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| ID | 4080973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1750515 |
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| End bp | 1752908 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 638010038 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_616710 |
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| Protein GI | 103487149 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC AAGAGGCGCT TTCCCTGTGG CCGGGGCCGG CCGCAGAAAC GCGCCCAGAT
CGCTTATGGG AGGAGAATGC CATGCGTGCG TCCAGCTTTA CCTTTATTCG TACCGTGCCC
GCTGCGGTCA GCGCGATCGC AATCGCCTTT GCCACGTCCG CCCAGGCGCA AGAAGTCGAA
GAGATCATCG TCACCGCGCA AAAGGTCGAG GAAAATGTCC AGAAGGTCCC GATCGCGATC
ACCGCGGTGT CCGGCGACCG CCTCGAAGCC ACCGGCACGA CCAGCCTGGA AGGGATCACG
CGCCTTGTCC CGTCGGTGAC CTTCCGCAAG GGCACGACAA GCGCGAACAG CGCCATCGTG
ATGCGCGGCG TCGGGACGAT CACCTTTTCG ATCGCCGCCG AACCGAGCGT ATCGACGGTG
ATCGACGGCA TCGTGCTCAG TCGCTCGGGG CAGGCTTTCA TGGACCTCGT CGATGCCGAA
CGTCTCGAGG TGCTGCGCGG GCCGCAGGGA ACGCTCTTCG GCAAGAATGC GTCGGCGGGG
CTCGTCAACA TCGTGTCGAA AGGGGGCACG GACCAGCTCG AAGCCGAAGC GAAGGCCGAA
TGGTTCGAAG GCGACGAGTA TCGCCTGCGC GCCTCGGTCG CAGGACCGCT CGGCGGCGAC
TGGAGCGGCC GCGTCACCGG CTTCTACGGC AGCTACGACG GCAATGTCAC GAACATCAAC
GGCGGTCGAA ACCGCAAGGT CAATGGTTAC GAACATTGGG GCACGCGGGG CATCGTGGAC
TATCGGGGCG ACGGCGCGCG CCTCCGCTTC ATCGCGGACT ATTTCAAGGC CGACGACGAT
TGCTGCGCCG ACGTGACGGG AGCGAGCCGC GGCGCCGTGC TCGATGCCGA ACTCGGTCTT
CCCGATGGCG TGGCGCTTGG CGAGAACCAG CGCTTCATCA ACCACAATCT GGTCACGCAA
ACGCGCGACA AGCAGTGGAG CCTGACCGCC AGCGGCGACT TCGACCTCAC CGATACGCAC
ACGCTCAGCG TGGTCGCCGG TTATCGCAAC TGGGAGAATC GAGAGATTCG CGAAGGCGAC
TTCCTGCCGC GCGCGATCGT CGGAACGGCG GAGCTGCACG ATGACGGGCT GGTGAAAACG
CAGCAATTCT CGGTAGAGGC GCGTATCGCA TCCGACCAGT CGATGCCCTT TTTCTATCAG
GTCGGCGCCT TTGCCTGGCA TTCGGACAAC AAGCAGGACT TCACGCGTCG CGACATCAGC
TGCGCCACCT CGACGCTGCC GGTCGATCCG GCGACGGGAG CACGGCCCTG CAATGTCAAC
GACATGGTCA ATACGCTGTT CCCGACAGCG ACGTCCAACA GCGACGTCAA TTCGACCAAC
TTCGCGCTCT TCGGACAGGC GACCTATCGC TTCAACGATC TGATCGCGCT GACCGGCGGC
CTTCGCTACA CGTGGGACGA TCTGAGCTTC ACGCACATCC GCGCGCCCGG CGTCAATGCG
TCGACCGGCC TGCCCGCAAC CGGACCTGGC ATCTCGGGCA ACCCCGCGGG CGGCACCGTC
GCATCCGGCG GCACGGGTCT CAACACCTCA AGCGGGTCGA GCAGCAACGG CAATCTGTCG
GGCAAGGCGG TGCTCCAGTT CACGCCGTCG GACGACATCA TGCTCTATGG CAGCTATACA
CGCGGGTATA AGGGGCCGGC GTTCAACGTT TTCTTCAACC ACACGGCGCC GACCAACGCG
GTTCCGATCG ACGAGGAAAC ATCGGACGCT TTCGAGATCG GCCTCAAATC GCGCTTCCTC
GACAACAAGG TTCAGCTCAA CCTCGCGGGT TTCAGCGTCG AATATGACGG CTTTCAGGCG
AATAATTTCG TGCTTCTGAA CGGCGCGGTC GTCACGAACC TGACCAACGC TGGCACGGTA
AAGAGCGAAG GTTTCGAGGC CGATCTCACC GCCGTGCCGG TGGACGGGCT GACCCTGCGC
GGAAGTGCGG CCTATGCCGA TGCGAAGGTC AAGAGGTTCA ACCCGAACCC GCTGACCAAC
GCGCCCGATG CGCGCGATGG AACGCGGCTC CCGCTTGCAC CGAAGTTCAC CTATACGCTC
GGCGCCGACT ATGACGTTCC GGTGGGTGGC ATGATATTGT ATCTGGGCAC GGATTATCGA
CACGTCTCGA AGCAATTTTC CGATCTCGGC GAACAGGGCG TTATCGACGC CTATGGCCAA
TGGAATGCGT CGATCGGCAT TTCGGATGCG GAGGATCGTT ACCGCCTGAC TTTCCACGCC
CGGAACATCA GCGACGAAAG CTACGTCCTG CTCAATGTCT CAAATGGTCA GCGCCTCCAG
ATCCCGCGCG ACGCCGACCG CTATTTCGGC GTCAGCCTGC GCGCGCGTAT GTAA
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| Protein sequence | MPKQEALSLW PGPAAETRPD RLWEENAMRA SSFTFIRTVP AAVSAIAIAF ATSAQAQEVE
EIIVTAQKVE ENVQKVPIAI TAVSGDRLEA TGTTSLEGIT RLVPSVTFRK GTTSANSAIV
MRGVGTITFS IAAEPSVSTV IDGIVLSRSG QAFMDLVDAE RLEVLRGPQG TLFGKNASAG
LVNIVSKGGT DQLEAEAKAE WFEGDEYRLR ASVAGPLGGD WSGRVTGFYG SYDGNVTNIN
GGRNRKVNGY EHWGTRGIVD YRGDGARLRF IADYFKADDD CCADVTGASR GAVLDAELGL
PDGVALGENQ RFINHNLVTQ TRDKQWSLTA SGDFDLTDTH TLSVVAGYRN WENREIREGD
FLPRAIVGTA ELHDDGLVKT QQFSVEARIA SDQSMPFFYQ VGAFAWHSDN KQDFTRRDIS
CATSTLPVDP ATGARPCNVN DMVNTLFPTA TSNSDVNSTN FALFGQATYR FNDLIALTGG
LRYTWDDLSF THIRAPGVNA STGLPATGPG ISGNPAGGTV ASGGTGLNTS SGSSSNGNLS
GKAVLQFTPS DDIMLYGSYT RGYKGPAFNV FFNHTAPTNA VPIDEETSDA FEIGLKSRFL
DNKVQLNLAG FSVEYDGFQA NNFVLLNGAV VTNLTNAGTV KSEGFEADLT AVPVDGLTLR
GSAAYADAKV KRFNPNPLTN APDARDGTRL PLAPKFTYTL GADYDVPVGG MILYLGTDYR
HVSKQFSDLG EQGVIDAYGQ WNASIGISDA EDRYRLTFHA RNISDESYVL LNVSNGQRLQ
IPRDADRYFG VSLRARM
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