| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1654 |
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| Symbol | |
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| ID | 4080962 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1739233 |
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| End bp | 1740429 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638010027 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_616700 |
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| Protein GI | 103487139 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.949528 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGCT TGTCCGAATC CCTGACCGCC TGCGCCCGGA AAATCGAAAG CCAGCACCTT
CGTCACGACC GGGACGCCGG AGTCATTCTG GTGCAGGTCG ACCAGATGGC GCGGATCAAC
AACAGCGCCG GGACCGCCGC GGGCGACGCG GTGCTCGACG AGATCGGCCG GCGGCTCGAA
AATTTTGCCG GCGACGAGTT CGGACCCGGT TCGTGCGTTG AGCGTCTCGA CGGGCCGCGC
TTTCTGATCG TGCCCGCCAC GCCGCTCGCG CTCGGCGCGC TGCGGGCGCA GGAGCGCGCG
CTGCACGTCG CGCTCGCCGA ACCGATCGTC GGCGATCCGA ACGGCCGTCT GTCGATCCGT
ATCGCCACCG CGCTGATCAC GCGCGACGAA TCAGTCGCCG AACAATTGCT TCAGGCGTGC
GACCAGCTTG CGCGGCCGGC GTCGGCGCGC GACGGGGCGA TGGTCCACGC GGCGCTGTCG
CGCGATGAGG TTGTGATCCA TTACCAGCCG CAATATGACG TCGTGACCGG CGCGATGACC
GGGGTGGAGG CATTGCTCCG CTGGCAGCAT CCCGAACTTG GTCTGCTTGG TGCCGGGCCG
CTGGTGACCG CCGCGCGCGC AGCGCGGCTC GAATGCGAAC TGACCGAACA TGCGCACCGC
GTCGCGCTCG CCGAAATGGC GGGCTGGCCG CGGCAACTTG CGCAGCTGCG CGTGTCGCTC
AACATCACCG CCGCCGACCT TGGCGACCCC GAATTCGCCG AACGCTTTGC CGCGATGGTG
AGGGCGGCAA AGGTCGATCC TGACCGGCTG ACGCTCGAAC TCACCGAACA GGCGATGTTG
AGCGACCCCG CGAGCGCGGC GGAGCACCTC GCGCAGATTC GCGCGCTGGG CTGCGCGATT
GCGATCGACG ATTTCGGAAC CGGCTATTCC AGCCTGTCGC TGCTGGCGCG GCTGCCGATC
GATTATCTGA AGATCGACAG CGGCTTTACC CGCACGATCG ACGGCAGCGA CCGCGACCGC
ATCGTCGTGC GCGCGATCGT TGACCTCGCG CGCGCGCTGG GGCTGCTGGT GGTGGCCGAG
GGGATCGAGA ACGAACGTCA GCTCGCGCGG CTTGGCGAGA TCGGGGTGGC GACGTGGCAG
GGGTTTTTGA AGTCAGGTCC GGTGCCGGGC GATCAGTTGC CGGGGTTGTT GGGCTAG
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| Protein sequence | MNRLSESLTA CARKIESQHL RHDRDAGVIL VQVDQMARIN NSAGTAAGDA VLDEIGRRLE
NFAGDEFGPG SCVERLDGPR FLIVPATPLA LGALRAQERA LHVALAEPIV GDPNGRLSIR
IATALITRDE SVAEQLLQAC DQLARPASAR DGAMVHAALS RDEVVIHYQP QYDVVTGAMT
GVEALLRWQH PELGLLGAGP LVTAARAARL ECELTEHAHR VALAEMAGWP RQLAQLRVSL
NITAADLGDP EFAERFAAMV RAAKVDPDRL TLELTEQAML SDPASAAEHL AQIRALGCAI
AIDDFGTGYS SLSLLARLPI DYLKIDSGFT RTIDGSDRDR IVVRAIVDLA RALGLLVVAE
GIENERQLAR LGEIGVATWQ GFLKSGPVPG DQLPGLLG
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