| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1651 |
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| Symbol | |
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| ID | 4080959 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1732973 |
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| End bp | 1735078 |
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| Gene Length | 2106 bp |
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| Protein Length | 701 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638010024 |
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| Product | DEAD/DEAH box helicase-like protein |
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| Protein accession | YP_616697 |
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| Protein GI | 103487136 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG1200] RecG-like helicase |
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| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAAGTTG GCAAAGCTCG CGCTAAACAC CGATCACCGA TGCGACCCGA AATCCTCAAT
CCACTCTTTG CCGCGCTCAC TGACCTGAAA GGTGTCGGGC CGCAACTCGC CAAGCCACTG
ACGCGGCTTG GGCTGGAGCG CCTCGTCGAT GTGCTGTTCC ATCTGCCGAC GGGACTCATC
TCGCGCATCG CCGTCGAGCG GCTCGATCAG GCGCAGCCCG GACAGACGAT CATCGTCGAT
CTGACCGTGC AGGATTATCG TCCCGGCCGC AGCCCGCGTG CCCCGTTCGG CGTCGAGGCG
TTCGATCGCG CGGGCGATCA TGTGCGGCTC GTCTATTTCG GGCGGACATC GGGGCTGGCG
CGCAAGCTGT TCCCGCTGGG CGAGACGCGC CGCGTGTCGG GGCGGCTCGA CCTGTACGGC
GACATGCGCC AGATCGTCCA TCCCGACCAT GTCGCCGAAC CCGGCGACGA AGGCGCGATA
GCTGAGCATG AGCCCGTCTA TCCGCTGACC GAAGGCCTCA CCAACGCGCG GCTGTCGCAG
CTTGCCGCGA TCGCGCTCGA CCGGCGCCCC GACCTCGCCG AATGGATCGA CGCGCCCCTG
CTCGCGAGCC GCAACTGGCC CGACTGGCGC GAGGCGGTGG CGCGCGCGCA CGCCAACCCG
CGCGACGAGG CCGCGCGCGA CCGGCTCGCC TATGACGAGA TTTTCGCCAA TCAGGTCGCG
CTGATGCTGA TCCGGCAGGG GCTGCGCAAC CGCAGGGGGC GCGCGATCGT CGGTGACGGC
CGCCTGACCG GCGCGCTACG CCTGCCGTTC GGGCTCACGG GGGCGCAGGA GCGCGTCGGG
CGCGAGATTG CGGGCGACAT GGCGCAGGAC ACGCCGATGC TGCGGATGCT GCAGGGCGAT
GTCGGGTCGG GCAAGACGCT GGTGGCGCTG CGTGCGATGC TGACCGCGGT CGAAGCGGGG
ACGCAGGCGG CGCTGCTCGC GCCGACCGAA ATCCTGGCGC GCCAGCATCA TGCGACCTTG
CGGGCGATGC TCGCGGGCCT GCCGGTGAAC CTCGCCATCC TGACCGGGCG CGACAAGGGG
CGGGTGCGCG AATCGACGCT GATGGGCCTC GCCGACGGCA GCATCGACAT ATTGATCGGC
ACCCATGCGA TTTTTCAGCA GGCGGTGACA TACAGGGATC TCGCGCTCGT CGTCGTCGAC
GAACAGCATC GCTTCGGCGT CGCGCAGCGG TTGATGCTGA CGCAAAAGGC GGCGCGGCCG
CCGCACCTGC TGGTGATGAC CGCGACGCCG ATCCCGCGCA CCCTGCTGCT CGCCAATCAT
GGCGAAATGG ACGTGTCGCG GATCGACGAG ATGCCGCCGG GGCGCACCCC CGTCGACACG
CGCGTCGTGT CGGTCGAGCG GCTCGACGAG GTGATCGCCT CGCTCGAACG CCATCTCGCG
ACGGGCGCGC AGGCCTATTG GGTGTGCCCG CTCGTCGCCG AAAGCGAGGC AAGCGAGCTG
GCGGCGGCCG AGGCCCGCGC CGCGCTGCTC GCCGAGCGGC TGGGCGCGGC GCGCGTCGGG
CTGGTCCACG GGCGGATGAA AGGGCCCGAA AAGGATGACG TCATGGCGCG CTTCCAGTCC
GGCGCGATCG GCGTGCTCGT CGCCACGACC GTGATCGAGG TGGGCGTCGA TGTCCCTGCC
GCCAGCCTGA TGGTCGTCGA ACATGCCGAG CATTTCGGCC TCGCCCAGCT GCACCAGCTG
CGCGGTCGCG TCGGGCGCGG CGCAGCGAAA TCGGTGTGCC TGCTGCTGCG GTCGCCGACT
CTGTCGGAGA CGGCGCGCGA GCGGCTGGCG CTGATGCGCG AGACCAACGA CGGCTTCGTG
ATTGCCGAAA GGGATCTCGA ACTGCGCGGC GGCGGTGAAC TGCTGGGCCT CAAACAGTCG
GGGGAGGCCG ATTATCGGCT GGCGAGCCCC GAACAGCTGG TGCGCCTGCT CCCCGTCGCG
CACGACGATG CGCGGCTGTT CGTCGAACGC GACGGCGGGA TGGAGGGCGC GCGCGGCGAG
GCGGTGCGGC TTTGTCTCTA TCTCTTCGAA CGCGATGCGG CGGTGCCGCT GCTACGGAGC
GGGTAG
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| Protein sequence | MQVGKARAKH RSPMRPEILN PLFAALTDLK GVGPQLAKPL TRLGLERLVD VLFHLPTGLI
SRIAVERLDQ AQPGQTIIVD LTVQDYRPGR SPRAPFGVEA FDRAGDHVRL VYFGRTSGLA
RKLFPLGETR RVSGRLDLYG DMRQIVHPDH VAEPGDEGAI AEHEPVYPLT EGLTNARLSQ
LAAIALDRRP DLAEWIDAPL LASRNWPDWR EAVARAHANP RDEAARDRLA YDEIFANQVA
LMLIRQGLRN RRGRAIVGDG RLTGALRLPF GLTGAQERVG REIAGDMAQD TPMLRMLQGD
VGSGKTLVAL RAMLTAVEAG TQAALLAPTE ILARQHHATL RAMLAGLPVN LAILTGRDKG
RVRESTLMGL ADGSIDILIG THAIFQQAVT YRDLALVVVD EQHRFGVAQR LMLTQKAARP
PHLLVMTATP IPRTLLLANH GEMDVSRIDE MPPGRTPVDT RVVSVERLDE VIASLERHLA
TGAQAYWVCP LVAESEASEL AAAEARAALL AERLGAARVG LVHGRMKGPE KDDVMARFQS
GAIGVLVATT VIEVGVDVPA ASLMVVEHAE HFGLAQLHQL RGRVGRGAAK SVCLLLRSPT
LSETARERLA LMRETNDGFV IAERDLELRG GGELLGLKQS GEADYRLASP EQLVRLLPVA
HDDARLFVER DGGMEGARGE AVRLCLYLFE RDAAVPLLRS G
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