Gene Sala_1627 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1627 
Symbol 
ID4081900 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1707402 
End bp1708448 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content65% 
IMG OID638009999 
Productrod shape-determining protein MreB 
Protein accessionYP_616673 
Protein GI103487112 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG1077] Actin-like ATPase involved in cell morphogenesis 
TIGRFAM ID[TIGR00904] cell shape determining protein, MreB/Mrl family 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCT TTTCCCGCTG GTTCAAATTC AATTCGCAAG ACATGGCCAT CGACCTCGGC 
ACCGCGAACA CGGTCGTCTA TGTGCGCGGC AAGGGCATCG TGCTCAACGA ACCTTCGGTC
GTCGCGGTCG AGACGCTGAA CGGGATCAAG CGGGTCAAGG CGGTCGGCGA CGACGCCAAG
CTGATGATGG GCAAGACCCC CGACAGCATC GAGGCGATCC GCCCGCTGCG CGATGGCGTG
ATTGCCGACA TCGACGTCGC CGAACAGATG ATCAAGCATT TCATCACCAA GGTGCACGGC
GGCAAGCCCA ACGCCTTCCG CAGCCCCGAA ATCGTCATCT GCGTTCCCTC GGGCTCGACG
AGCGTCGAAC GCCGTGCGAT CCGCGACGCC GCATCGAACG CGGGCGCGAG CGAAGTGTGG
CTGATCGAGG AGCCGATGGC CGCCGCGATC GGCGCCGACA TGCCGGTGAC CGAACCCATC
GGGTCGATGG TCGTCGACAT CGGCGGCGGC ACCACCGAAG TCGCGGTGCT GTCGCTTCGC
GGTCTCGCTT ACACCACCTC GGTCCGCGCC GGCGGCGACA AGATGGACGA GGCGATCGTC
TCCTATGTCC GCCGCCACCA TAATCTGCTG ATCGGCGAAT CGACCGCCGA ACGGATCAAG
AAGGATTTCG GCATCGCGCG CATCCCCGCC GACGGCGTGG GCCTGACGAT CCACATCAAG
GGCCGCGACC TCGTCAACGG GGTGCCCAAG GAAATCTCGA TCAACCAGGC GCAGATCGCC
GAGGCGCTGT CCGAACCGAT CGGCACGATC GTCGAGGGCG TGCGCATCGC GCTCGAAAAC
ACCGCACCCG AACTCGCCGC CGACATCGTC GATCAGGGGA TCGTGCTGAC CGGCGGCGGC
GCGCTGATCG CCGAACTCGA CGAATTGTTG CGCGATGCGA CCGGCCTGCC GGTGACGGTC
GCCGACGATC CGCTGACCTG CGTTGCGATC GGCACCGGTC GCGCGATGGA AGACCCCGCC
TTCCGCGGCG TGCTCCAACA AGCCTGA
 
Protein sequence
MSFFSRWFKF NSQDMAIDLG TANTVVYVRG KGIVLNEPSV VAVETLNGIK RVKAVGDDAK 
LMMGKTPDSI EAIRPLRDGV IADIDVAEQM IKHFITKVHG GKPNAFRSPE IVICVPSGST
SVERRAIRDA ASNAGASEVW LIEEPMAAAI GADMPVTEPI GSMVVDIGGG TTEVAVLSLR
GLAYTTSVRA GGDKMDEAIV SYVRRHHNLL IGESTAERIK KDFGIARIPA DGVGLTIHIK
GRDLVNGVPK EISINQAQIA EALSEPIGTI VEGVRIALEN TAPELAADIV DQGIVLTGGG
ALIAELDELL RDATGLPVTV ADDPLTCVAI GTGRAMEDPA FRGVLQQA