Gene Sala_1623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1623 
Symbol 
ID4081896 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1702552 
End bp1702953 
Gene Length402 bp 
Protein Length133 aa 
Translation table11 
GC content70% 
IMG OID638009995 
ProductMerR family transcriptional regulator 
Protein accessionYP_616669 
Protein GI103487108 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.473197 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGATGA CGATCGGCAA ACTGGCCGCC GCGGGCGATG TCGGGGTAGA GACGATACGC 
TATTATCAGC GCCGCGGCCT GATGGGCACG CCCGCGCGCA GCGGCGGCGA CGGCTGGGGC
GGCGGCGTGC GCCGCTATGG CGATGATGAT CTCAGACGGC TTAGATTTAT CCGCGCGGCG
CAGGCAGCGG GCTTCACGCT CGACGAGATC GGCGAATTGC TCGCGCTCGA CCAGAGCGAC
GACCGCGCCC GTGTCCGCGC CCTCGCGCGC CAGCGCATCG ACGCGCTCGA CGCCAAGATC
GCCCAGATGA CCGCAACGCG CGCCGCTCTC GCGCGCCTCG CCGATCAATG CGCCGCGAGC
GAGACGGGGC CGTGCCCGAT TATGGCGGCG TTCGAGCCCT GA
 
Protein sequence
MQMTIGKLAA AGDVGVETIR YYQRRGLMGT PARSGGDGWG GGVRRYGDDD LRRLRFIRAA 
QAAGFTLDEI GELLALDQSD DRARVRALAR QRIDALDAKI AQMTATRAAL ARLADQCAAS
ETGPCPIMAA FEP