Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1615 |
Symbol | |
ID | 4081888 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 1695860 |
End bp | 1696831 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638009987 |
Product | GumN |
Protein accession | YP_616661 |
Protein GI | 103487100 |
COG category | [S] Function unknown |
COG ID | [COG3735] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.733049 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.353745 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCT GGTTCAAGAT TCTCGCCTCC AGCTGCGCGA TCATTCCCTT TGCGCAGTGC GCACTGATCC CCGGCGGCAA TATCGTCCAC GCGGCCGAAA CGCCCCCCGC CCCTGTCACA ATGGCGCCCG CGACCGCCGC CGAGACCGCC CCCGAGACCG CCGATGCCGA CCCCGCGCTG TGGGTGGTCA GGGACGAGGA CACGACCATC TATCTGTTCG GCACCGTCCA TGTGCTGAAA CCCGGCCTCA GCTGGTTCGA CGAGGCGGTG AAGGATGCGT TCGACAAGTC CGACCAGCTG ATGCTCGAAC TCGTGCTGCC CGACGATCAG GCCGAGGTGG CCAGGACGAT GCTGCCGCTC GCGATCGACG CGAACGGCAC GACGCTGACC TCGCGGCTCG ATGCCGAGCA GCTCGCGGCC TATCAGGCGG CGATGGCGAG CGTCGGCCTG CCTCCGGCGC AATTCGACAT GTTCGAACCC TGGTTCCCCG CGATCACCCT GTCGGTCCTG CCGCTCACCA AATTGGGCTA TGACCCCGAA CAGGGCGCCG AAAAGCAGCT CACGCGCTTT GCCAGGGCCA GCGGCAAGCC GGTCGCGGGA TTCGAAACAC TGGGCGAACA GCTCGGCTTC TTCGACAGCC TGCCCGAAGC GCAGCAGATC GCCTTCCTCA ATTCGGTGGT GAAGGATCTC GACAAGCTGG GGCCGACGCT CGACAGGATG GTCGTGCTGT GGGCGAAGGG CGATCCCGAC GGACTCGCGG TCGCGATGAA CGAAAGCCTC GCCGCAACGC CCGCGCTGGC GCAGACGCTG CTTTACGATC GCAACGCGCG CTGGGCCGAC GCGCTCAAGG CGCGGATGGA GCAGCCGGGC ACGGTGTTCG TCGCGGTCGG CGCGGGGCAT CTGGCGGGCG AGAAAAGCGT GCAGGATTAT CTGAAAGAGC GCGGCCTGAC CGTAACGCGG GTCGATTATT GA
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Protein sequence | MTTWFKILAS SCAIIPFAQC ALIPGGNIVH AAETPPAPVT MAPATAAETA PETADADPAL WVVRDEDTTI YLFGTVHVLK PGLSWFDEAV KDAFDKSDQL MLELVLPDDQ AEVARTMLPL AIDANGTTLT SRLDAEQLAA YQAAMASVGL PPAQFDMFEP WFPAITLSVL PLTKLGYDPE QGAEKQLTRF ARASGKPVAG FETLGEQLGF FDSLPEAQQI AFLNSVVKDL DKLGPTLDRM VVLWAKGDPD GLAVAMNESL AATPALAQTL LYDRNARWAD ALKARMEQPG TVFVAVGAGH LAGEKSVQDY LKERGLTVTR VDY
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