Gene Sala_1615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1615 
Symbol 
ID4081888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1695860 
End bp1696831 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content66% 
IMG OID638009987 
ProductGumN 
Protein accessionYP_616661 
Protein GI103487100 
COG category[S] Function unknown 
COG ID[COG3735] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.733049 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.353745 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACCT GGTTCAAGAT TCTCGCCTCC AGCTGCGCGA TCATTCCCTT TGCGCAGTGC 
GCACTGATCC CCGGCGGCAA TATCGTCCAC GCGGCCGAAA CGCCCCCCGC CCCTGTCACA
ATGGCGCCCG CGACCGCCGC CGAGACCGCC CCCGAGACCG CCGATGCCGA CCCCGCGCTG
TGGGTGGTCA GGGACGAGGA CACGACCATC TATCTGTTCG GCACCGTCCA TGTGCTGAAA
CCCGGCCTCA GCTGGTTCGA CGAGGCGGTG AAGGATGCGT TCGACAAGTC CGACCAGCTG
ATGCTCGAAC TCGTGCTGCC CGACGATCAG GCCGAGGTGG CCAGGACGAT GCTGCCGCTC
GCGATCGACG CGAACGGCAC GACGCTGACC TCGCGGCTCG ATGCCGAGCA GCTCGCGGCC
TATCAGGCGG CGATGGCGAG CGTCGGCCTG CCTCCGGCGC AATTCGACAT GTTCGAACCC
TGGTTCCCCG CGATCACCCT GTCGGTCCTG CCGCTCACCA AATTGGGCTA TGACCCCGAA
CAGGGCGCCG AAAAGCAGCT CACGCGCTTT GCCAGGGCCA GCGGCAAGCC GGTCGCGGGA
TTCGAAACAC TGGGCGAACA GCTCGGCTTC TTCGACAGCC TGCCCGAAGC GCAGCAGATC
GCCTTCCTCA ATTCGGTGGT GAAGGATCTC GACAAGCTGG GGCCGACGCT CGACAGGATG
GTCGTGCTGT GGGCGAAGGG CGATCCCGAC GGACTCGCGG TCGCGATGAA CGAAAGCCTC
GCCGCAACGC CCGCGCTGGC GCAGACGCTG CTTTACGATC GCAACGCGCG CTGGGCCGAC
GCGCTCAAGG CGCGGATGGA GCAGCCGGGC ACGGTGTTCG TCGCGGTCGG CGCGGGGCAT
CTGGCGGGCG AGAAAAGCGT GCAGGATTAT CTGAAAGAGC GCGGCCTGAC CGTAACGCGG
GTCGATTATT GA
 
Protein sequence
MTTWFKILAS SCAIIPFAQC ALIPGGNIVH AAETPPAPVT MAPATAAETA PETADADPAL 
WVVRDEDTTI YLFGTVHVLK PGLSWFDEAV KDAFDKSDQL MLELVLPDDQ AEVARTMLPL
AIDANGTTLT SRLDAEQLAA YQAAMASVGL PPAQFDMFEP WFPAITLSVL PLTKLGYDPE
QGAEKQLTRF ARASGKPVAG FETLGEQLGF FDSLPEAQQI AFLNSVVKDL DKLGPTLDRM
VVLWAKGDPD GLAVAMNESL AATPALAQTL LYDRNARWAD ALKARMEQPG TVFVAVGAGH
LAGEKSVQDY LKERGLTVTR VDY