| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1595 |
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| Symbol | hslU |
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| ID | 4083032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1670905 |
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| End bp | 1672206 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638009964 |
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| Product | ATP-dependent protease ATP-binding subunit HslU |
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| Protein accession | YP_616641 |
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| Protein GI | 103487080 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1220] ATP-dependent protease HslVU (ClpYQ), ATPase subunit |
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| TIGRFAM ID | [TIGR00390] ATP-dependent protease HslVU, ATPase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.472132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.884744 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAAAG ATTTGACCCC GAAGGCGATC GTCGCCGCAC TGGACACGCA TATCATCGGC
CAGGATGCGG CGAAGCGCGC GGTCGCGGTG GCGCTGCGCA ACCGCTGGCG CCGCCAGCAG
CTGCCCGCCG AGCTGCGCGA CGAGGTGACG CCGAAGAATA TCCTGATGAT CGGCCCCACC
GGCTGCGGCA AGACCGAGAT TTCGCGCCGC CTGGCCAAGC TCGCCGATGC GCCCTTCATC
AAGGTCGAGG CGACCAAGTT CACCGAGGTC GGCTATGTCG GCCGCGACGT CGAGCAGATC
GCGCGCGACC TCGTCGAAGA GGCGGTGCGG CTGGAAAAGG ACCGCCGCCG CGACGCCGTG
CGCGCCGCCG CCGAAGAGGC CGCGATGGAA CGGCTGCTCG ACGCGCTCAC CGGCAAGGGC
GCGAGCGAGG CGACGCGCCA GAGCTTTCGC CAACGCATCC GCGAAGGCCA TCTCGACGAC
AGCGAGGTGG AGATCGAGGT CGCCGACGCG CCCGGCATGA GTTTCGAACT GCCCGGCCAG
CCGGGGCAGA TGAGCATGAT CAACCTGTCC GACATGCTCG GCAAGGCGAT GGGCGGCCTG
CCCAGGAAAC GCCGCAAGAT GAAGGTGATC GACGCCGCGA CGCGGTTGAT CGAGGAGGAG
CAGGACAAAA GGCTCGACCA GGACGATGTC GCCCGCGTCG CGCTCGCCGA TGCCGAGGCC
AACGGCATCG TCTTCCTCGA CGAGATCGAC AAGATCGCGG TCAGCGACGT GCGCGGCGGA
TCGGTCAGTC GCGAGGGGGT GCAGCGCGAC CTCTTGCCGC TCATCGAGGG CACGACCGTC
GCGACCAAAT ATGGCCCGAT GAAGACCGAT CATATCCTCT TCATCGCGTC GGGCGCCTTT
CACGTCGCCA AGCCCAGCGA CCTGCTCCCC GAACTCCAGG GCCGCCTGCC GATCCGCGTC
GAACTCGGTG CGCTCACCGA GGAGGATTTC GTCCGCATCC TGAGCGAGAC GAAGGCGGGG
CTGCCCGAAC AATATGTCGC GCTGCTCGGC ACCGAGGGCG TGACGCTGAA CTTCGCCCCC
GACGCGATCG CGCGCGTCGC GAAACTCGCC GCCGAAGTGA ACGAAAAGGT CGAGAATATC
GGCGCGCGCC GACTTCAGAC GATCATGGAA CGGCTGGTCG AGGAAATCAG CTTCACCGCC
GAGGATGCTC CCGGCGCGAC GATCGACATC GACGCCGCCT ATGTCGACCG CCAGCTTGCC
GATGTCGTGG GCGACACCGA TCTCAGCAAA TATGTGCTTT AG
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| Protein sequence | MNKDLTPKAI VAALDTHIIG QDAAKRAVAV ALRNRWRRQQ LPAELRDEVT PKNILMIGPT
GCGKTEISRR LAKLADAPFI KVEATKFTEV GYVGRDVEQI ARDLVEEAVR LEKDRRRDAV
RAAAEEAAME RLLDALTGKG ASEATRQSFR QRIREGHLDD SEVEIEVADA PGMSFELPGQ
PGQMSMINLS DMLGKAMGGL PRKRRKMKVI DAATRLIEEE QDKRLDQDDV ARVALADAEA
NGIVFLDEID KIAVSDVRGG SVSREGVQRD LLPLIEGTTV ATKYGPMKTD HILFIASGAF
HVAKPSDLLP ELQGRLPIRV ELGALTEEDF VRILSETKAG LPEQYVALLG TEGVTLNFAP
DAIARVAKLA AEVNEKVENI GARRLQTIME RLVEEISFTA EDAPGATIDI DAAYVDRQLA
DVVGDTDLSK YVL
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