Gene Sala_1591 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1591 
Symbol 
ID4083028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1667037 
End bp1668332 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content66% 
IMG OID638009960 
ProductUDP-glucose/GDP-mannose dehydrogenase 
Protein accessionYP_616637 
Protein GI103487076 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase 
TIGRFAM ID[TIGR03026] nucleotide sugar dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.117032 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.926821 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCATCG ATAGCGACCA GAATGTTACC GTCCTCGGTC TGGGCTATAT CGGCCTGCCC 
ACCGCGGCGT TGATCGCGCG GTCGGGCAGC AAGGTCACGG GCGTCGATGT CAGCAAGCAT
GTCGTCGAGA CGGTGAACAG CGGCAAGGTG CATATCGAGG AGGTCGATCT CGACGGCCTT
GTCCAGGGCG TCGTTTCACG CGGCTCGCTG GTCGCCTCGA CAAAGGTCGC CCCCGCCGAC
GTGTTCGTGA TTGCGGTCCC GACCCCGCAC GACGACGAGC ATCGCCCCGA CATCAGCCAT
GTGCTCTCGG CCGCACGCGC CATCGCGCCG CAACTCGTAC CCGGCAATCT CGTCATCCTC
GAATCGACCT CGCCCGTCGG CACGACCGAA AAGGTCGCGG CGCTGCTCGC CGAGCTGCGC
CCCGACCTCA AGGTTCCGGG CGCCTGCACC GGCGCCGCCG ACATCTTCGT CGCCTATTGC
CCCGAGCGCG TGCTGCCGGG GCGCATCCTC GTCGAGCTGG TCGACAATGA CCGCTGCATC
GGCGGGATCA CCCCGCGCTG CGCGCGCCGT GCGATGACCT TTTATCGCCA GTTCGTTCGC
GGTGCCTGCG TCACCACCTC GGCGCGCGCC GCCGAAATGG TGAAGCTGGT CGAGAACAGC
TACCGCGACG TCAACATCGC CTTTGCCAAC GAGCTGTCGA TGATGGCCGA ACATCTCGGC
GTCGATATAT GGGAGGTGAT CCGCCTCGCC AACCGCCACC CGCGCGTCAA TATCCTGCAA
CCCGGCCCCG GCGTCGGCGG TCATTGCATC GCGGTCGATC CCTGGTTCCT CGTCCATGGC
GCGCCCGGCC ACAGCCGCCT GATCCGCACC GCGCGCGAGG TCAATCTCGC CAAGACAGCG
CATGTCATCG GCGCCGCCGA AATGCTGGTG TCGCAGCATC CGGAAGCGCG CGTCGCCTGC
CTCGGCCTCG CCTTCAAGCC CAATATCGAC GATTTTCGCG AAAGCCCCGC GGTCGAAGTC
GCCGCCGCGC TCGCGCGCCG TTTCGGCCAG CAGATCCGCA TCGTCGAACC CTATGCGCGC
GGACTGCCCA TGGACTTCGC GGGCACGGGC GCCGAACTGA TCGATCTCGA CAGCGCCCTG
GCGAGCTGCG ACCTGCTCAT CGTCCTGGTC GACCACGATC TGTTCAAGTC GATCCCGCTC
GAGGAACGCG GCGACAAGAT TGTCTATGAC ACGCGCGGGC TGTGGCCCGA TCAGCCAAGT
GTCGGCAATA CAAACCGTTT CACTCGCGCA GCCTGA
 
Protein sequence
MPIDSDQNVT VLGLGYIGLP TAALIARSGS KVTGVDVSKH VVETVNSGKV HIEEVDLDGL 
VQGVVSRGSL VASTKVAPAD VFVIAVPTPH DDEHRPDISH VLSAARAIAP QLVPGNLVIL
ESTSPVGTTE KVAALLAELR PDLKVPGACT GAADIFVAYC PERVLPGRIL VELVDNDRCI
GGITPRCARR AMTFYRQFVR GACVTTSARA AEMVKLVENS YRDVNIAFAN ELSMMAEHLG
VDIWEVIRLA NRHPRVNILQ PGPGVGGHCI AVDPWFLVHG APGHSRLIRT AREVNLAKTA
HVIGAAEMLV SQHPEARVAC LGLAFKPNID DFRESPAVEV AAALARRFGQ QIRIVEPYAR
GLPMDFAGTG AELIDLDSAL ASCDLLIVLV DHDLFKSIPL EERGDKIVYD TRGLWPDQPS
VGNTNRFTRA A