| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1584 |
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| Symbol | |
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| ID | 4083021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1659023 |
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| End bp | 1660414 |
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| Gene Length | 1392 bp |
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| Protein Length | 463 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009953 |
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| Product | O-antigen polymerase |
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| Protein accession | YP_616630 |
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| Protein GI | 103487069 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.791545 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.565949 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA ATATCTTTCG TTCGAGTTCG GCGCCGGAAC TGGTCCTGGT CCTGATCCTG
GTGGCCGCGC TGATCCTGGG AGGCAGCGGC CGCGACGATG TGACGTCGCT TATTGTCCTT
CGCCCGATTT CGATGCTGGC GCTCGCGGTC GCCCTTTGCT TTTTGCCGCG CGCCGTTTGG
CAACGGAACA AGGCGCTGCT GACGTGCGCG TTCGCGGCGG TCCTGCTGGT TGCCCTTCAA
TTGGTGCCGC TTCCCCCAGC GATCTGGCAC GCCCTGCCTG GGCGCGACTT TGTTGTGGCG
ATCGACCGGG CGGCAGGCAT GCCCGACATC TGGCGACCGG TGAGCCTGGT TCCCTATCGC
ACGGCGAACG CGCTGATGGC GCTGGCGCTT CCCGTCGCCG TGCTGTTGCT CGCGTTGACC
ATTGAGCGAG AACGCCATTA CCGCATCGCG CTGCTCCTTC TGGCGGGGGT GTTCGCCTCC
GCCTTGTTCG GTCTCCTTCA GATCATCGGG GGTGAAGGCA ATCCCTTTTA CCTGTACAGG
ATCACCAATG ACGGATCCGC CGTTGGCCTT TTCGCCAATC GAAACCACCA TTCGGTTGCG
CTCGCCATGG GCTTTCCTCT GACCGCTGCG CTTGTCGCGA TGACCATGCG CAGGAATGAG
GAGAATTCTG GCGCGTTGCA ATGGGGTGGG CTGGCTTTCG CTGCGCTATT GTTGCCATCC
CTCCTTGTCG CGCAGTCCCG GGCGGGGGTT CTGATGGGCC TGGTCGGTTT GGCATCGGTG
CCCTTCATCC TCAAGATATC GCCGTTGCAG ATCGCGGCGG GGCTTGGGGG GCGCGGCGTG
AAGTGGAAGA TGGGGCTTGC GCTCGCCGCG CTTGTCGCGG TCGCTTTCCT GACCGTCCAG
ATGACAGCGT TCAATTCCTT CGACCGGCTG TTCGCGTCGG CTTCCGGCTC TGAAGCGTCG
CTGCGTTTCA ATACCTGGCC CGCGGCGATC CGGCTGGCAA TGGAAAGTCT GCCGTTCGGG
ACGGGAATGG GAAGCTTTGT TGAAGCATAT CGCGTCGTCG AACCCGATTT CATGTTGCGA
CCGCAGTATA TGAATCATGC TCATAATGAC CTCATCGAAC TCTTTCTGAC AGGCGGCTTG
CCTGCGATGC TATTGCTCGC TGTGAGCCTG GTCGTCGTCG TGCGCGGCTA TTTTCGCGGA
TCGTCGGAAG ATCGGTCGGG AACCTCGCTG ATGTTCCGGC GGCTGGGCGC CGTCCTCCTG
CTGCTCGTCT TCCTGGCGAG CTGCTATGAT TATCCGCTGC GGACGCCGCT TATGGCCGCG
ATTTTTTCGC TTGCGCTGAC CTGGACAGCG GGGCGATCGG TTGGTGACCA ATCGTCGGGC
GAAAGGCGTT GA
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| Protein sequence | MKKNIFRSSS APELVLVLIL VAALILGGSG RDDVTSLIVL RPISMLALAV ALCFLPRAVW
QRNKALLTCA FAAVLLVALQ LVPLPPAIWH ALPGRDFVVA IDRAAGMPDI WRPVSLVPYR
TANALMALAL PVAVLLLALT IERERHYRIA LLLLAGVFAS ALFGLLQIIG GEGNPFYLYR
ITNDGSAVGL FANRNHHSVA LAMGFPLTAA LVAMTMRRNE ENSGALQWGG LAFAALLLPS
LLVAQSRAGV LMGLVGLASV PFILKISPLQ IAAGLGGRGV KWKMGLALAA LVAVAFLTVQ
MTAFNSFDRL FASASGSEAS LRFNTWPAAI RLAMESLPFG TGMGSFVEAY RVVEPDFMLR
PQYMNHAHND LIELFLTGGL PAMLLLAVSL VVVVRGYFRG SSEDRSGTSL MFRRLGAVLL
LLVFLASCYD YPLRTPLMAA IFSLALTWTA GRSVGDQSSG ERR
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