Gene Sala_1583 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1583 
Symbol 
ID4083020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1656624 
End bp1658837 
Gene Length2214 bp 
Protein Length737 aa 
Translation table11 
GC content60% 
IMG OID638009952 
Productprotein-tyrosine kinase 
Protein accessionYP_616629 
Protein GI103487068 
COG category[D] Cell cycle control, cell division, chromosome partitioning
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0489] ATPases involved in chromosome partitioning
[COG3206] Uncharacterized protein involved in exopolysaccharide biosynthesis 
TIGRFAM ID[TIGR01007] capsular exopolysaccharide family 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.918295 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCACA TTGAAACTTC GCGTCCTGCG CCGCGGCCGC TGGCAACCCT TGCAGGGGAG 
GAGTCCGGAG CCGGCCAGCC GCAAGGCTCG CTCAAGCCCA TCCTCATCGA ATATCTGCAC
ATTTTCAAAC GACGGAAATG GTGGATCGCA TCGACAATCT GTAGCGCGCT GATCATCGCG
CTTGTCGTCA CCTTGCTGAT GCGTCCGGTG TATACGGCAA CGACTCAGAT CGAGATCAAC
CGGGAGCAAA AGAATATCAC CAACGTCGTG GGCATCGAAT CCGAAGCGAC GGGACGCAAT
CTGGAGTTTT ATCAGACGCA ATACTCGTTG ATGGAAGCAC GTTCGCTGGC CGAGCGCGTT
GCCAAGCGGC TGCGCCTTGA GACGAACGAG AATTTCTGGG CCGCTCATGG GATCGATATG
TCTGATTTTT CAGACGCCGA TGCCCGGTCG CCGCGGCCAT CGCGCGGGTC GAGCGAGCGG
TTGCGCATCA CGGTCGATAC GCTGCTTGAC CATGTCGTGA TCAGCCCGAC CAGGGGGTCG
GCCCTCGTCG ACGTCAGCTA TTCGTCCTAT GACCCGGAAA TGTCGGCGCA GATTGCCAAC
GCCTGGGCCA ATGAGTTCAT CGCGCAGAGC ATCGCGCGCA AGTTCGATTC GACGGCCGAG
GCGCGCAGCT TCCTCGAACG TCGCCTTGCC GAGTTACGTC AGCGTGTCGA GGATTCGGAG
CGCGCGCTGG TCGATTTCGC GTCGAGCCGA AACATCGTAA CGATCGGAAA CAATGAAAAT
GGCGCAGGCA GCACGGCGCA GATTCGCGAG CGTACGCTCG CGGCCGACAG CCTGAGCTCG
CTGAACAGCG AATTGGTGAA AGCGACAGCG GATCGCATCC TGATGGAATC CAGAACCCGC
GCAATCGGTG CGGTGCGAAC CAATGACACC TTGTCGCGAT TGCGTGAACA GCGGGCAAAG
GACGCCTCCG AATATGCGCA GCTCATGCAA CAGTTCGATC CGGGCTATCC TGTGGCGATG
GCGCTGCAAC GTCGCATCGA CGAACTCGAC CAGTCGATTG CGCGGGAGGA GCAGCGCATC
ACGCGCGAAG CGCGCGAGGA TTATCGTGCA GCCGTGGAGC GTGAAAACAA TCTGAAAGCG
CGGGTCGTAG CGCTGTCGAA CCAGGTGCTC GACCAGCGCC GCGACGCGAT CCAGTACAAT
ATTTATCAGC GTGAGGCCGA TACCAACCGT CAGCTTTATG ATGCTCTGCT GCAGCGTTAC
AAGGAAATCG GGGTCGCGGG CGTTTCGGCG AACAACATCG CGGTGATCGA CCGCGCCGAG
CCTCCGCGTC TGCCGTCGTC GCCGAAACTG CTGGTCAACC TGTTCATCGC GCTTGTCCTG
GGGTCGATTG CGGCGCTGGT GCTGGTGTTC TTACTGGAAC AGTCGCAGGA AGGCGTGAGC
GACCCGTCGC GCATTCCGGA CCAGCTAGGT CTGCCCTTGC TGGGCAGTGT GCCCAAGGTC
GAAGAAGGCG TGGCGATCGT CGAAGAGATC CGCGACCCGA AATCAAACGT GTCCGAAGCC
TATTTCGCGA TCAAGTCGAG TCTGGCCTTC TCGACCTCTC ACGGCATTCC GCGGTCGATC
ATGGTCGTCA GTTCGCAGCC CGCGGAAGGC AAGAGCATAT CCTCGCTGTC GCTTGCGACC
GTGCTTGCGC GGGTGGGCAA AAAGGTGATT CTGATCGACG TCGACATGCG CAAGCCCTCG
CTGCACAAGC ATATCGGGGT CAAGCGGGAC CACGGTGTCA GCAACTATCT GGCGGGCGAG
GACGACTATC GTCCGCTCAT CAGGGAAGTG ATGCCGAATC TTGACTTCAT TCCCGCCGGA
CCGTCTGTGC CAAGCGCTGC CGAATTGCTC AGTAGCGATC GGATGGCAGA CTTTGTCAGG
ACGCTTGAGA AACATTATGA TCATGTGATC GTCGATTCCG CCCCGATCAT CGGGCTGGCC
GACGCGCCGC TCCTCAGCCG GACCGTCGAA GCGGTGGTGG TCGTCATTGA GGCCGGCCGT
GTTCCGGTCC GCGGCATCAA TTCGGCGCTG TCACGATTGC GTTCGGCTGG GGCGCCGCTG
ATCGGCGTCA TTTTGACGAA ACTCGACAAG CGTGATTCGG AATATGGCTA TGGATACGCA
TATTCCTATG AATATACGAG CCGAGGTGCC GAAACCGAGT CGGCCAGTGG CTGA
 
Protein sequence
MNHIETSRPA PRPLATLAGE ESGAGQPQGS LKPILIEYLH IFKRRKWWIA STICSALIIA 
LVVTLLMRPV YTATTQIEIN REQKNITNVV GIESEATGRN LEFYQTQYSL MEARSLAERV
AKRLRLETNE NFWAAHGIDM SDFSDADARS PRPSRGSSER LRITVDTLLD HVVISPTRGS
ALVDVSYSSY DPEMSAQIAN AWANEFIAQS IARKFDSTAE ARSFLERRLA ELRQRVEDSE
RALVDFASSR NIVTIGNNEN GAGSTAQIRE RTLAADSLSS LNSELVKATA DRILMESRTR
AIGAVRTNDT LSRLREQRAK DASEYAQLMQ QFDPGYPVAM ALQRRIDELD QSIAREEQRI
TREAREDYRA AVERENNLKA RVVALSNQVL DQRRDAIQYN IYQREADTNR QLYDALLQRY
KEIGVAGVSA NNIAVIDRAE PPRLPSSPKL LVNLFIALVL GSIAALVLVF LLEQSQEGVS
DPSRIPDQLG LPLLGSVPKV EEGVAIVEEI RDPKSNVSEA YFAIKSSLAF STSHGIPRSI
MVVSSQPAEG KSISSLSLAT VLARVGKKVI LIDVDMRKPS LHKHIGVKRD HGVSNYLAGE
DDYRPLIREV MPNLDFIPAG PSVPSAAELL SSDRMADFVR TLEKHYDHVI VDSAPIIGLA
DAPLLSRTVE AVVVVIEAGR VPVRGINSAL SRLRSAGAPL IGVILTKLDK RDSEYGYGYA
YSYEYTSRGA ETESASG