| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1577 |
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| Symbol | |
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| ID | 4082691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1649923 |
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| End bp | 1650720 |
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| Gene Length | 798 bp |
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| Protein Length | 265 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 638009946 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_616623 |
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| Protein GI | 103487062 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.240015 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG ATCGTCCGCT TTCAGGAAAG CTGGTGGTGC TCACCGGCGC GGGCGGCATC
ATCGGACGTG TCGCGACCGG CCTGTTCGTT CGCAACGGTG CGCGTCTGGT GATGGTCGAC
CGGTGCGAAC AGGCCCTGAC TGCGGCGCGG GAAGCGCTGG GGGATGACAA GGCAGCGGCG
TTCGCCATGC CCTGCGACCT GACCGACCCG CGGCAGGTCG CGGAACTGGC CGAAAACGTC
GGTGCGGAGC ACGGGCCGGT CGATGCCCTG TTCAACAACG TAGCCGGCAA GACGCAGAAT
ATCTTTGCGC CATTCGAACA TTTTCCGCTG GACGAATGGA ATGAGGTAAT GGCGATGAAC
CTGACCACGG CGATGCTGTG CTGCCAGCAT TTCGGCGCGC AAATGGCGGC GCGGGGGCAG
GGAACAATCG TCAATACGCT TTCCATCTAT GGCATCGTCG GGCCGGATCA GCGCATTTAC
GACGGCGCCC AATATGAAGG CCGCGCCATC AACTCACCAG CGGTTTACAG CGCGGCAAAG
GCGGGGCTGT GGGGACTGAC GAAATATCTT GCCACCTACT GGGGTCCAAA GGGCGTGCGC
GTCAATGCCG TGACGCCAGG CGGCGTTTAC AGCGGCCAGA ACGAAACCTT TGTTGACCGA
TATTCTGCCC GTGTGCCGAT GGGACGCATG GCGAAAGCCG AAGAGATTGC GGACGCCATG
CTGTTTCTCG CCAGCGATGG CGCGTCCTAC ATCAATGGCC AGAACATCGT GGTTGACGGA
GGGCTGACGA CATGGTGA
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| Protein sequence | MSKDRPLSGK LVVLTGAGGI IGRVATGLFV RNGARLVMVD RCEQALTAAR EALGDDKAAA
FAMPCDLTDP RQVAELAENV GAEHGPVDAL FNNVAGKTQN IFAPFEHFPL DEWNEVMAMN
LTTAMLCCQH FGAQMAARGQ GTIVNTLSIY GIVGPDQRIY DGAQYEGRAI NSPAVYSAAK
AGLWGLTKYL ATYWGPKGVR VNAVTPGGVY SGQNETFVDR YSARVPMGRM AKAEEIADAM
LFLASDGASY INGQNIVVDG GLTTW
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