Gene Sala_1576 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1576 
Symbol 
ID4082690 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1648877 
End bp1649929 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content65% 
IMG OID638009945 
ProductN-acylneuraminate-9-phosphate synthase 
Protein accessionYP_616622 
Protein GI103487061 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2089] Sialic acid synthase 
TIGRFAM ID[TIGR03569] N-acetylneuraminate synthase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTGAGCG GCGAGCGGTC CGTCGAACGG ACATTCGTTA TCGCGGAAGC GGGCGTCAAC 
CACGACGGAT CGCTCGACAA GGCGTTGCGT CTTGTCGATA TCGCCGTCGA GGCCGGAGCC
GATGCGGTCA AGTTTCAGAC ATTCCGAACC GACGAGGTGG TCACGCCCGA CGCCGCCAAG
GCCGCCTATC AACAACGTCA AACGGGCGCG GGCACGCAAT ATGAGATGAT CCGGGCGCTC
GAGCTGGACG ATGCCGCGCA CGAAAGACTT GCGCGCCATT GCGCCGAGCG CGGGATCGAG
TTCATGTCGA CGCCCTTTGC GCCTTGGGCG GTCGATATGC TGCTGGGCCT GGGAATGCGG
CGGATCAAGA TCGCCTCGGG CGAAATTGTC AACAAACCGC TGATTGACAA GGTTGCAGGC
TCGGGTCGGC CCATCATCCT ATCGACCGGC ATGGCCGAGA TGGCGGAGGT CGTGAGGGCG
GTCGACTGGA TACGCACGGC GCAAAGCGCG GCAGGCATCG CAATGTCACC GGGAGACCTC
GTCGTCCTTC ACTGCACCTC CGAATATCCG GCGCCGGCCG CCAGCGTGAA TCTGCGTGCC
ATGGATACGC TGGCTGCGGC GCTCGATGTG CCGGTCGGCT ATTCGGATCA CAGCCTGGGC
ATAGAGATTG CGGTCGCGGC GGTCGCGCGT GGCGCGGCGG TGATCGAAAA GCATTTTACC
GAAAACAGCC GCGATCACGG CCCCGATCAC GCGGCGTCGC TGGAACCGGC GCAACTGCGC
GCGATGGTCG ATGCCATTCG CAATGTCGAA GTTGCGCTTG GCGATGGCGT AAAGCGGCCC
GCGCCGCTCG AGCTTCCGAC GCGCGCGCTG GTTCGTCGCA GCGCATTTGC GCTGACCGAC
ATCAATAGGG GTGACAGGCT CGACGCCACG ACCATCGCCT TTCTGCGTCC CGGCGACGGC
ATCGGTCCCG AACGGGCGGA CTGGCTCTTT GCGCGCACGG CGGCGCGCGA CATCGCGCGG
GGCAGCAAGC TGTGCGAGGA TGATATCGGG TGA
 
Protein sequence
MVSGERSVER TFVIAEAGVN HDGSLDKALR LVDIAVEAGA DAVKFQTFRT DEVVTPDAAK 
AAYQQRQTGA GTQYEMIRAL ELDDAAHERL ARHCAERGIE FMSTPFAPWA VDMLLGLGMR
RIKIASGEIV NKPLIDKVAG SGRPIILSTG MAEMAEVVRA VDWIRTAQSA AGIAMSPGDL
VVLHCTSEYP APAASVNLRA MDTLAAALDV PVGYSDHSLG IEIAVAAVAR GAAVIEKHFT
ENSRDHGPDH AASLEPAQLR AMVDAIRNVE VALGDGVKRP APLELPTRAL VRRSAFALTD
INRGDRLDAT TIAFLRPGDG IGPERADWLF ARTAARDIAR GSKLCEDDIG