| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1574 |
|---|
| Symbol | |
|---|
| ID | 4082688 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1647074 |
|---|
| End bp | 1647727 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638009943 |
|---|
| Product | putative serine O-acetyltransferase |
|---|
| Protein accession | YP_616620 |
|---|
| Protein GI | 103487059 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily |
|---|
| TIGRFAM ID | [TIGR03570] sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGCTGCAC CAAAGATCAT CATTGTCGCA ACAGGGGGGC TGGGCCGCGA GGCGCTCTGG
GCTGCGCGCG AATCGCGCGA GGGCTGGGAC GTGGCGGGCT TTCTGGACGA TGATGAAGCG
TTGCAGGGAG GTTCGGTCTG CGATGTTCCG GTGCTTGGCA GGGTCGACGA CTGGCCCCGC
TTCGCCGACC ATCATTTCCT GGTCGCCATT GGCGCCCCGC GGTCACGACA GGCCGTGGTT
CGTCGCATGA TGGCAGCCGG AAATCCCCGC TTCGGCACTG TGGTGCATCG CAGCGCCGCC
CTGTCCGGCT ATGTGTCGAT CGGCGAGGGC AGTCTCATCT GCGCGAATGT GTCCATCACG
ACGCAGATAA GGATTGGGCG GCATGTGATC ATAAATCTGA ACACCACGGT TGGGCATGAC
ACCGAACTGG GCGATTTCTG TACCCTGGCG CCGCTGGTCG CCTGTTCGGG GGCGGTCACG
GCGGGTGCGG GGGTCGAAAT CGGAACGGGG GCTTGCATCC GGCAGGGGCT GATGCTGGGG
CAGGGGTGCA TGATCGGCAT GGGAAGCACG CTGACCAAGG ATGTTCCCGC CAACAGCCTG
TGGCTCGGAA ACCCCGCGAC CGACCGCCGA CCACTCGACG AGTTCCTGTT GTGA
|
|---|
| Protein sequence | MAAPKIIIVA TGGLGREALW AARESREGWD VAGFLDDDEA LQGGSVCDVP VLGRVDDWPR
FADHHFLVAI GAPRSRQAVV RRMMAAGNPR FGTVVHRSAA LSGYVSIGEG SLICANVSIT
TQIRIGRHVI INLNTTVGHD TELGDFCTLA PLVACSGAVT AGAGVEIGTG ACIRQGLMLG
QGCMIGMGST LTKDVPANSL WLGNPATDRR PLDEFLL
|
|---|
| |