| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1566 |
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| Symbol | |
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| ID | 4082680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1636960 |
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| End bp | 1637919 |
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| Gene Length | 960 bp |
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| Protein Length | 319 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 638009935 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_616612 |
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| Protein GI | 103487051 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.13324 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCAGAAAA CGAAATTTGG ACGTCGGCGC GTCCTGGTTA CAGGCGGGGC CGGTTTTCTG
GGCTCGCACC TTGTGGACCG CTTGCTGGCC CGCGGCGACG AAGTTCTTTG CGTCGATAAT
CTGTTCACAG GCGATAAGAG CAACCTCGAC CATCTGGCGG GAAATCCCCT GTTCGAATTC
ATGCGGCACG ACGTTTGCTT TCCGCTGTTT GTCGAGGTTG ACGCGATCTT CAATCTCGCA
TGTCCGGCAT CGCCAATTCA CTATCAGCAC GATCCCGTGC AAACGACCAA AACGAGCGTC
CACGGCGCGA TCAACATGCT GGGCCTTGCC AAGCGGCTGA AGGTGCCGAT CTTTCAGGCA
TCGACGAGCG AAGTCTATGG TGACCCGACG ATGCACCCGC AGCAGGAAAG CTATTGGGGA
AATGTCAATC CCATTGGTAT TCGCAGTTGC TATGATGAAG GCAAGCGTTG CGCGGAAACG
CTGTTCTTCG ATTATCATCG GCAGCACCAG CTGGACATAA AGATTGCCCG CATCTTCAAT
ACCTATGGAC CCCGGATGCA CGCGGCCGAC GGCCGCGTCG TTTCCAATTT CATCGTTCAG
GCGCTGCACG GCGAAGACAT CACGATTTAC GGCGACGGCT CACAGACCCG GTCATTCTGT
TACGTTGACG ATCTGATCTC GGCTTTCGTT GCGTTTATGG ACGCCGGGCC GAACGTCCAC
GGACCTATAA ATATCGGTAA TCCTGCCGAG TTCACGATTC TCGAACTTGC GGAGAAGATA
TTGTCCAAGG TCGGCGGCGC GTCGAAGCTC GTGCGTCAAC CTCTGCCCCA GGACGACCCG
TTGCAGCGGC AGCCCGACAT CAGCCGGGCG AAGGCGCAAC TGGGGTGGGA GCCGACGGTC
GAACTTGATG AAGGTCTTGA CCGCACGATC GCCTATTTCC GTCGCAAGCT GGAAATCTAG
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| Protein sequence | MQKTKFGRRR VLVTGGAGFL GSHLVDRLLA RGDEVLCVDN LFTGDKSNLD HLAGNPLFEF
MRHDVCFPLF VEVDAIFNLA CPASPIHYQH DPVQTTKTSV HGAINMLGLA KRLKVPIFQA
STSEVYGDPT MHPQQESYWG NVNPIGIRSC YDEGKRCAET LFFDYHRQHQ LDIKIARIFN
TYGPRMHAAD GRVVSNFIVQ ALHGEDITIY GDGSQTRSFC YVDDLISAFV AFMDAGPNVH
GPINIGNPAE FTILELAEKI LSKVGGASKL VRQPLPQDDP LQRQPDISRA KAQLGWEPTV
ELDEGLDRTI AYFRRKLEI
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