Gene Sala_1552 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1552 
Symbol 
ID4082721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1619140 
End bp1619661 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content72% 
IMG OID638009920 
Product2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase 
Protein accessionYP_616598 
Protein GI103487037 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0801] 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase 
TIGRFAM ID[TIGR01498] 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATG CAAGGCCGCT GCCCCTCTAT GCGATCGGCC TCGGGTCGAA TCGCCGCCAC 
GCGCGCCATG GCGACCCTCG CGCCGTGCTG CTCGCCGCGC TCGCCGCGCT CGAAAGCGAT
GACATAGAGG CTGTCGACGC CAGCCCGATC ATCGCCAGCG ATCCCATCGG CCCCTCGCGC
CGCCGCTATG CCAATGCCGT CGCGCTCGTC GCGTCGGACC TGAGCCCCCC CGAAATGCTC
GAACGGTTGC AGGCGATCGA GGCGCGTTTC GGCCGTCGCA CCGGTCAACG CTGGGGCTCG
CGCACACTCG ACCTCGACAT ATTGCTCTGG TCGGGCGGCG CCTGGTCCGA CGCCGGGCTG
ACCATCCCCC ACCCTGCGCT CGCGCACCGC GCGTTCGTGC TCGGCCCGCT CCGCGCGATC
GTGCCCCAAT GGCGCCACCC GCTCCACGCG CGCAGCATCC GCCAGCTCGC CGCGCGGCTC
GTCCGTCCAA AGCCGGTTGA CCGCCGCGCC GCAGCGCACT AG
 
Protein sequence
MSDARPLPLY AIGLGSNRRH ARHGDPRAVL LAALAALESD DIEAVDASPI IASDPIGPSR 
RRYANAVALV ASDLSPPEML ERLQAIEARF GRRTGQRWGS RTLDLDILLW SGGAWSDAGL
TIPHPALAHR AFVLGPLRAI VPQWRHPLHA RSIRQLAARL VRPKPVDRRA AAH