| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1549 |
|---|
| Symbol | |
|---|
| ID | 4082718 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1616922 |
|---|
| End bp | 1617869 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638009917 |
|---|
| Product | Alpha/beta hydrolase fold-3 |
|---|
| Protein accession | YP_616595 |
|---|
| Protein GI | 103487034 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.149777 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGACG GCACCCCCCA TTATACGCGC CCCGATGTGG CGGCTTTTCT GGCCTTTCTG
AATATGCAGG AAGGCCCGAA GATGGAGGAG ATGCCGCCAG AGGGCGCGCG GGAGATGTTC
CGGGCGATGG GCCAGATCGC CGATGTTCCG CGCGGCGAGA TAGCCCATGT CGAGGATCGC
ACCATCCCCG GACCCGCAGG CGCGCTTCCG ATCCGGATCT ACGATAATCG CCCCGATCGC
GAGCCCGGCC CGGTGATGGT CTTCTATCAC GGTGGCGGCT GGGTGATCGG CGATCTCGAC
ACGCACGATC CCTATTGCGC CGAGGCGGCG CGGCAGCTCG ACATGCCCGT GATCGCCGTC
GATTACCGCC TCGCCCCCGA ACATCCCTTT CCCGCGGCGC CCGAAGATTG CGAAGCGGCA
ACGCGCTGGG TCGCCGACAA TGTCCCCTGT ACCGGTCTCG TGCTTTCGGG CGAGAGCGCG
GGCGGCAATC TGACGATCGC GACCGCGCTG ACGTTGCGCG ACAAGCCGGC GTCGAAACCG
GTCATCGCCA TCCATCCCAT CTATCCCGCC GTGACGACGC GCGACGACTG GCAAAGCTAT
CGTGATTTCG GCGAGGGCCA TTTGCTCACC AAAGGCGGCA TGGCCTGGTT CGGCAATCAT
TATGCCGCGG ATCCCGGAGA CTATCGGGCT TCGCCGCTCG ATTTCCCGGC GGAAGGCCTG
CCGCCGACGC TGCTGGTCAC CGCGGGGCTC GACCCGCTGC GCGACCAGGG CCGCGCCTAT
GCCGCGAAGC TGATCGAGGC GGGCGTGCCG ACCAGCTTTC GCGAGGCAAA GGGCAATATC
CACGGCTATA TAAACCTGGC GCAAGGCATC CCCAGCGCAA AGGACGATAT TCGCGGCGCC
CTCACCATAT TGAAAGCAAT CGTCGCCGAC GCTAACGCCG CGGCATGA
|
|---|
| Protein sequence | MTDGTPHYTR PDVAAFLAFL NMQEGPKMEE MPPEGAREMF RAMGQIADVP RGEIAHVEDR
TIPGPAGALP IRIYDNRPDR EPGPVMVFYH GGGWVIGDLD THDPYCAEAA RQLDMPVIAV
DYRLAPEHPF PAAPEDCEAA TRWVADNVPC TGLVLSGESA GGNLTIATAL TLRDKPASKP
VIAIHPIYPA VTTRDDWQSY RDFGEGHLLT KGGMAWFGNH YAADPGDYRA SPLDFPAEGL
PPTLLVTAGL DPLRDQGRAY AAKLIEAGVP TSFREAKGNI HGYINLAQGI PSAKDDIRGA
LTILKAIVAD ANAAA
|
|---|
| |