| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1547 |
|---|
| Symbol | |
|---|
| ID | 4082716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1613838 |
|---|
| End bp | 1614866 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638009915 |
|---|
| Product | 2-oxoglutarate ferredoxin oxidoreductase subunit beta |
|---|
| Protein accession | YP_616593 |
|---|
| Protein GI | 103487032 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0421561 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGACCA TCGCGCGGAC GACGACGCTA AAGGATTGGG AAACCGATCA GGAAGTCCGC
TGGTGCCCCG GTTGCGGCGA CTATGCGATC CTGAAGGCGG TGCAGCGCAC GATGCCCGAA
ATCGGCACCG CGCCCGAGAA CACCGTGTTC GTCAGCGGCA TCGGCTGCTC GTCGCGCTTC
CCCTATTATA TGGAAACCTA TGGCTTTCAC ACGATCCACG GTCGCGCGCC GGCGTTTGCG
ACGGGGCTGA AGCTCGCCAA TCCGCAGCTC GACATCTGGA TCGTCACCGG CGACGGCGAC
GGACTGTCGA TCGGCGGCAA CCACACGATG CACCTCATTC GCCGCAATCT CGATTGCCAG
ATCATGCTGT TCAACAACGA GATTTATGGC CTCACCAAGG GGCAATATTC GCCGACCAGT
CGCGTCGGCA CGACCAGTCC CTCGACCCCC TATGGATCGG TCGATCGTCC GGCGCAGCCC
GCGGCCTTTG CGCTCGGTGC GGGCGCGCGG TTCGTCGCGC GCGGCTTCGA CGTATCGAAG
GAATTGCCGA ACGTGCTGAA GGCGGCGCAT GCCCACAAGG GCGCCGCCTT TATCGAGATT
TTTCAGAACT GTATCGTCTA TAACAAAGAC GTGTTCGAGG ATTTTGCCGC TCCCAAGGGC
GCCGAGGACC GCCAGCTCTG GCTCAAGCAT GGCGAACCGA TGCTCTATGC CAAGGGCACC
AAGGGCATCG CGCTCGACGC CGAGGCGCTG CACCTCAAGA CCGTCGAGGT CGTCGACGGC
GACTGGCAGG CCGCGGGGGT GATCGTTCAC GACGTCACCA ATCGCAGCGT CGCCCACATG
CTCGTCGAGA TGCGCTTCGG CGAGTTTCCG ATGGCGCTGG GCGTCCTCTA CGACGACCCG
CGGCCGACCT TCGAGGCCGA TGTCTGGCGC CAGAATGCCG CCGCAGCCGA AGGCAAAACC
GCCGACCTGC AAAGCCTGCT CAAGAAGGGA CAAACCTGGA CAGTGACCGA AAAGGGCTCC
GAGCTCTGA
|
|---|
| Protein sequence | MTTIARTTTL KDWETDQEVR WCPGCGDYAI LKAVQRTMPE IGTAPENTVF VSGIGCSSRF
PYYMETYGFH TIHGRAPAFA TGLKLANPQL DIWIVTGDGD GLSIGGNHTM HLIRRNLDCQ
IMLFNNEIYG LTKGQYSPTS RVGTTSPSTP YGSVDRPAQP AAFALGAGAR FVARGFDVSK
ELPNVLKAAH AHKGAAFIEI FQNCIVYNKD VFEDFAAPKG AEDRQLWLKH GEPMLYAKGT
KGIALDAEAL HLKTVEVVDG DWQAAGVIVH DVTNRSVAHM LVEMRFGEFP MALGVLYDDP
RPTFEADVWR QNAAAAEGKT ADLQSLLKKG QTWTVTEKGS EL
|
|---|
| |