| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1545 |
|---|
| Symbol | |
|---|
| ID | 4082714 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1611507 |
|---|
| End bp | 1612787 |
|---|
| Gene Length | 1281 bp |
|---|
| Protein Length | 426 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638009913 |
|---|
| Product | cyclopropane-fatty-acyl-phospholipid synthase |
|---|
| Protein accession | YP_616591 |
|---|
| Protein GI | 103487030 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2230] Cyclopropane fatty acid synthase and related methyltransferases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.474119 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACACGC ATGTCAGCCC CCGCCGCGGC AAGGAACTGC TCCGCGCCGA CCGTGCCTAT
CGCGCGGGCG GGGTGATGGC GCGGTTGATT GCGCTGGCGC CGACGGCGCT GTTCCACCGC
CTGCTCGACC GCATCGACGC GGGGCTGCTC GCCGGGACGA TCGAGGGGCA TTTGCCCGAC
GGGAGCGTCC GGCTGCTCGG CGGGCGCGGC AGGGGGCCGA CGGCGATCGT CCATCTGCAC
AGCTGGGCGG CGCTGGCGCG GCTTGCGCTG TCGGGGTCGG TCGGCTGGTA CCGCGCGTGG
GAAAAGGGCG AATGGACGTC GCCCGATCCG GTGCCGCTGT TCGACCTGTT CATGCGCAAT
GGCGAGGCGC TGGGTAATGC AGGGCGCGCG CACGGCCCGT CGCGCTGGCT GAACCGCGTT
ATTCACGCGC TTCACCGCAA CGACCGGCGC GGGGCGCGGC GCAACATCCA CGCGCATTAT
GATTTGGGCA ATGATTTCTA TCGGTTATGG CTCGATCATG CGATGAACTA TTCGAGCGCA
CTATTCGCCG ATCCGGCCCA GTCGCTGGAG GAAGCGCAGG CGGCAAAGCT CGACGCGATC
CTCGACCGGC TCGACCTCAG GTCGGGAAGC CGGCTGCTCG AAATCGGCTG CGGTTGGGGC
GCACTCGCCG AACGCGCGGT CGAGCGGCAC GATGTGATCT ATACCGGCAT CACCCTGTCG
CCCTCGCAAG CCGAAATCGC CGACGCGCGG CTGGCGGCGG TCGATCTGTC GGGGCGTTCG
CGGATCGAGC TTTGCGACTA TCGCGACGTA CAGGGGCCGT ACGACGCGAT CGCCAGCGTC
GAAATGGTCG AAGCGGTGGG GCAGGCCTAT TGGCCCGCCT ATCTCGATGC GATCGCGCGC
TTGTTGCGGC CCGGCGGCAA GGCGGCGATC CAGTATATCC TGATCAACGA CGCGCTGTTC
GAGCGCTATG CGGCGAGCAG CGATTTCATT CAGGCCTATA TCTTCCCCGG CGGCTGCCTG
CTGTCCGAAA GTCGCTTCCG CGCGCTCGCG GAGGAACGAG GGCTGATCTG GCGCGACGCT
CATCATTTTG GCGGCGACTA TGCAGAAACG CTGCGCCAAT GGCGCGAGCG TTTCGACGCC
GCGGTGGCCG ACGATCGGCT GCCGCCCGGT TTCGACGCAC GGTTCGTCGG GCTTTGGCGC
TATTATCTGC AATATTGCGA GGGAGGCTTT CGCGGCGGCG GGATCGACGT CGCGCAGGTC
ACACTTGAAA AACCGGCTTG A
|
|---|
| Protein sequence | MNTHVSPRRG KELLRADRAY RAGGVMARLI ALAPTALFHR LLDRIDAGLL AGTIEGHLPD
GSVRLLGGRG RGPTAIVHLH SWAALARLAL SGSVGWYRAW EKGEWTSPDP VPLFDLFMRN
GEALGNAGRA HGPSRWLNRV IHALHRNDRR GARRNIHAHY DLGNDFYRLW LDHAMNYSSA
LFADPAQSLE EAQAAKLDAI LDRLDLRSGS RLLEIGCGWG ALAERAVERH DVIYTGITLS
PSQAEIADAR LAAVDLSGRS RIELCDYRDV QGPYDAIASV EMVEAVGQAY WPAYLDAIAR
LLRPGGKAAI QYILINDALF ERYAASSDFI QAYIFPGGCL LSESRFRALA EERGLIWRDA
HHFGGDYAET LRQWRERFDA AVADDRLPPG FDARFVGLWR YYLQYCEGGF RGGGIDVAQV
TLEKPA
|
|---|
| |