Gene Sala_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1540 
Symbol 
ID4082439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1607054 
End bp1607434 
Gene Length381 bp 
Protein Length126 aa 
Translation table11 
GC content68% 
IMG OID638009908 
Productphosphoribosyl-AMP cyclohydrolase 
Protein accessionYP_616586 
Protein GI103487025 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0747629 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGAGC AGCGCGATAC GACCGACCGA TTTCTCCCGC GTTTCGATGC CGCCGGGCTG 
GTGACGGCGA TCGTCGTCGA CGCCGACACG CAGGCGCTGT TGATGGTCGC ACATATGAAT
GCGGATGCGA TCGAGGCGAC GCGCGCGACG GGGCAGGCGC ATTTCTGGTC GCGTTCGCGC
TCTGCGCTGT GGCGCAAGGG CGAGACGTCG GGCAACGGGC TGACGCTGGT CGAGATGCGC
GTCGATTGCG ATCAGGACGC GCTGCTGCTG CGCGTGAAGC CCGCGGGGCC CGCCTGTCAC
ACCGGGCGCC GGTCGTGCTT CTATCGCCGC GTCGAGGCCG ACGGCGGCCT GACCTTCCTT
GCGGACGATG CGCAGGGTTA G
 
Protein sequence
MDEQRDTTDR FLPRFDAAGL VTAIVVDADT QALLMVAHMN ADAIEATRAT GQAHFWSRSR 
SALWRKGETS GNGLTLVEMR VDCDQDALLL RVKPAGPACH TGRRSCFYRR VEADGGLTFL
ADDAQG