Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1538 |
Symbol | |
ID | 4082437 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1606042 |
End bp | 1606503 |
Gene Length | 462 bp |
Protein Length | 153 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638009906 |
Product | MerR family transcriptional regulator |
Protein accession | YP_616584 |
Protein GI | 103487023 |
COG category | [K] Transcription |
COG ID | [COG0789] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.129222 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACGTTCA CGTCAACGGA AACTAGTTTC GTCGGCATGA CCGAACCCTA CGGCCACTCG CATATCGATA CGCCCGACCA TCTGGGGCGC GAACAGTTCA GCATCACCGA CTTGTCGACC GAGTTCGGCG TCACCGCCCG TGCGCTGCGC TTCTATGAGG ATGAGGGGCT GATCAGTCCG TCGCGCAAGG GATTGTCGCG AATCTATTCG AAGCGCGACC GCGCGCGGCT CGCGTGGATT CTGCGCGCGA AGCGCACCGG CTTCAGCCTC GCCGATATCC GCGAGATGAT CGACCTGTAT GATGTCGGCG ACGGCCGCAA GCTGCAACGG CAGGTGACGA TCGAGAAATG CGAGGAACGC ATCGCGTTGC TCCGCCGCCA GCGCGACGAT ATTGACAGCG CTGTAGATGA ACTGTCACGT TTCATCGAAA TGGTGAAAAA GGTCGACGCC GGCAAGAAAT AG
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Protein sequence | MTFTSTETSF VGMTEPYGHS HIDTPDHLGR EQFSITDLST EFGVTARALR FYEDEGLISP SRKGLSRIYS KRDRARLAWI LRAKRTGFSL ADIREMIDLY DVGDGRKLQR QVTIEKCEER IALLRRQRDD IDSAVDELSR FIEMVKKVDA GKK
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