| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1533 |
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| Symbol | |
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| ID | 4082432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 1599221 |
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| End bp | 1601059 |
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| Gene Length | 1839 bp |
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| Protein Length | 612 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009901 |
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| Product | carbamoyl-phosphate synthase L chain, ATP-binding |
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| Protein accession | YP_616579 |
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| Protein GI | 103487018 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.385954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCAGT CCCTCCTCAT CGCCAATCGC GGCGAGATCG CCTGCCGCAT CATCCGCACC
GCACGCGAGA TGGGCATTCG CACCGTCGCG GTCTATTCGG ACGCCGACGC CAAGGCGCTG
CATGTCCGGC AGGCCGATGA GGCCGTGCAT ATCGGCCCGT CGCCGGCGCG CGAATCCTAT
CTGGTGGGCG AGAAGATCGT TGCGGCCGCG AAGGCGACCG GGGCCGAGGC GATCCATCCG
GGTTATGGCT TCCTGTCGGA GAACGCCGCG TTCGCGCAGG CGGTCATTGA CGCCGGGCTG
GTCTGGGTGG GGCCAAACCC CGCAAGCATC ACCGCGATGG GGCTCAAGGA TGCCGCGAAG
AAGCTGATGG CCGAGGCCGG GGTTCCGGTG ACGCCGGGCT ATATGGGCGA GAACCAGGAT
CCCGCTTTCC TCGCCGAACG GGCCGCCGAG ATCGGCTATC CCGTCCTCAT CAAGGCCGTC
GCGGGCGGCG GCGGCAAGGG GATGCGCAAG GTGGATAGCC CGGCTGACTT CCTCGACGCG
CTTGCCTCGT GCCAGCGCGA GGCGGCGGCG TCGTTCGGCA ACGACCATGT GCTGATCGAG
AAATATATCC TCACCCCCCG CCATATCGAG GTGCAGATAT TCGGCGACAC GCACGGCAAT
GTCGTCCACC TGTTCGAACG CGACTGCTCG CTCCAGCGCC GCCACCAGAA GGTGATCGAG
GAAGCCCCCG CCCCCGGCAT GGACGAGGCG ACGCGCGCCG AGCTGTGCGC CGCCGCGGTG
CGCGCCGCAA AGGCGGTCGA TTATGTCGGC GCGGGGACGA TCGAGTTCAT CGCCGACGCG
AGCGAGGGCC TGCGCGCCGA CCGCATCTGG TTCATGGAAA TGAACACGCG GTTGCAGGTC
GAGCATCCGG TGACCGAGGA AATCACCGGC GTCGATCTGG TCGAATGGCA GCTGCGCGTC
GCGAGCGGCG AGCCATTGCC CCTGACGCAG GACCAGCTTG CAATCAACGG CTGGGCGATG
GAAGCGCGGC TTTATGCCGA AGACCCCGCC AAGGGCTTTC TGCCGAGCAC GGGCACGCTC
GAACTCTTCC AGCTTCCCGA GCATATCGGC CGCATCGACA CCGGCGTCTA TGAAGGCGCC
GAGGTGTCGC CCTTCTATGA CCCGATGATC GCCAAGGTCA TCGCTTATGG CGAGAACCGC
GAAGAAGCGC GCGAGCTGCT TTCGGAGATG CTGGAGGACA GCGCGATCTG GCCGGTCAAA
ACCAATTCGG CCTTTCTGAT CGCCGCGCTC GATCATCCTG ATTTCGTCGC GGGCACCGTC
GATACCGGCC TGATCGGTCG CGATGGCGAT GCGATGACCG CTGCGCCCGA ACCTTCGGCG
CAGGCACTGA CCAATGCCGC AATGGCGATG GTGCCGCGCG CGTTACAGGC GGGGTTCCGC
CTCAACGCCC CCGAGGTGCG CACCGCGCCC TTCCTGCTCG ACGGCAAGCG GGTCGACGTT
GCGCTCCACG GCCCCGGCGC CGAAGAACCC GCCCCCGCGA TGCTCGTCGC CGAGGGTGGG
TCGGTGTGGC AATTGGCACC CTGGCGCGCC GAGGGCAGCG CGAGCGGCGC GGCGGGCGAC
GGCGCGATCC TGTCGCCCAT GCCCGGCAAG ATCATCGCGG TCGAGGTTGC CGCGGGCGAC
ACGGTGGCCA AGGGACAGAA GCTGCTCACG CTCGAAGCGA TGAAGATGGA GCACAGCCTG
GTTGCGCCGT TCGACGGCGT GGTGGCGGAG CTTAACGCGG TGGCAGGCGG ACAGGTGCAG
GTCGAGGCAT TGCTGGCGCG GATCGAGGCG GCGAAATGA
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| Protein sequence | MIQSLLIANR GEIACRIIRT AREMGIRTVA VYSDADAKAL HVRQADEAVH IGPSPARESY
LVGEKIVAAA KATGAEAIHP GYGFLSENAA FAQAVIDAGL VWVGPNPASI TAMGLKDAAK
KLMAEAGVPV TPGYMGENQD PAFLAERAAE IGYPVLIKAV AGGGGKGMRK VDSPADFLDA
LASCQREAAA SFGNDHVLIE KYILTPRHIE VQIFGDTHGN VVHLFERDCS LQRRHQKVIE
EAPAPGMDEA TRAELCAAAV RAAKAVDYVG AGTIEFIADA SEGLRADRIW FMEMNTRLQV
EHPVTEEITG VDLVEWQLRV ASGEPLPLTQ DQLAINGWAM EARLYAEDPA KGFLPSTGTL
ELFQLPEHIG RIDTGVYEGA EVSPFYDPMI AKVIAYGENR EEARELLSEM LEDSAIWPVK
TNSAFLIAAL DHPDFVAGTV DTGLIGRDGD AMTAAPEPSA QALTNAAMAM VPRALQAGFR
LNAPEVRTAP FLLDGKRVDV ALHGPGAEEP APAMLVAEGG SVWQLAPWRA EGSASGAAGD
GAILSPMPGK IIAVEVAAGD TVAKGQKLLT LEAMKMEHSL VAPFDGVVAE LNAVAGGQVQ
VEALLARIEA AK
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