| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1523 |
|---|
| Symbol | |
|---|
| ID | 4080037 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1588393 |
|---|
| End bp | 1589172 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638009891 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616569 |
|---|
| Protein GI | 103487008 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2968] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.811201 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.922639 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACC GCAAGCCCGG TTCACAGGAG AATGAAATGA CGAAGCAAAT GCTCGCCGCC
ATGGCGTCCG GACTGGCCCT GATCGCGGCG GCGCCCGCCG TCGCGCAGCA AGGAGGTTCG
ACAGGGACGG TGGCGACGAT GCAGCATCCG ATCCTGAGCT TCAGCGTCAG CGAGGAGGTG
CGTTCGCGCC CCGACCAGGC GACCGTCGGC GCCGGGGTCA CGACGACCGC GCCCACTGCG
GTCGAGGCGA TGCGCGCCAA TGCCGCGGCG ATGGACAGGC TGATCGCGGC TGCCAAGGCG
CGCGGGATCA AGGCCGAGGA CATCCAGACG AGCGGGATCA ACCTGTCGCC GCAATATGAC
TACAGCAACC GCACCGACGG CCAGCCGCCG CGCTTCCTGG GCTATCAGGT GTCGAATACA
GTGCGCGCGA CGACCGGGAA AATCGACGAT ATCGGCCCGT TGCTCGATGC GCTGGTCGCT
GCGGGCGGCA CCAATATCGA GGGGCCGTGG TTCGCGATGA AAGATCCCGA CGCGCAGCTC
GTCGGCGCGC GCGGTGCAGC GATCAAGGCG GCGGAGGCGA AGGCGACCGA TTATGCGCGC
CTTGCCGGCT ATCGCGCCGC CGAGCTGGTG TCGATCGGCG AGGGCGGCTT TGCCGGTCCG
CAACCGCCGA TGCCCTATGC GCGGATGGAG ATTGCCGCCG ATGCCAAGTC GACGCCGGTC
GAGCCGGGGC GGGTGTCGAA CACGCTGACA CTCAATTTCC AGTATCGGCT GGTGCGGTAA
|
|---|
| Protein sequence | MKDRKPGSQE NEMTKQMLAA MASGLALIAA APAVAQQGGS TGTVATMQHP ILSFSVSEEV
RSRPDQATVG AGVTTTAPTA VEAMRANAAA MDRLIAAAKA RGIKAEDIQT SGINLSPQYD
YSNRTDGQPP RFLGYQVSNT VRATTGKIDD IGPLLDALVA AGGTNIEGPW FAMKDPDAQL
VGARGAAIKA AEAKATDYAR LAGYRAAELV SIGEGGFAGP QPPMPYARME IAADAKSTPV
EPGRVSNTLT LNFQYRLVR
|
|---|
| |