| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1522 |
|---|
| Symbol | |
|---|
| ID | 4080036 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1587606 |
|---|
| End bp | 1588262 |
|---|
| Gene Length | 657 bp |
|---|
| Protein Length | 218 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 638009890 |
|---|
| Product | 2OG-Fe(II) oxygenase |
|---|
| Protein accession | YP_616568 |
|---|
| Protein GI | 103487007 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.716956 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.97292 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTCTT CGGGCGCCGA CCGCACCGCA GCGCGGCTTG CCGCCGTCCC CGGCATCCGC
CGCGCGCCGA CATCCAGGCT CGAACAGTTC ATGCTGCCGC GCTTCCTCGA CGCCGAAACC
TGCGCCGCGC TGATCGACCT GATCGACAGC GACGCGCGCC CGTCAACGAT CGCCGATGCC
AATGGCGACG CGGCGTTCCG CACCAGTTCG ACCTGCGATC TCGACCACCG CCTTCCGATC
GTGATCGCGG TCAACAACAA GCTTCACGAC CTCACCGGCA TTCCGCTCGC ATATGGCGAG
CCGTTGCAGG GCCAGCGTTA CGACATCGGC GAGGAGTTCA AGGCGCACAC CGACTATTTC
GATCCGCACG GCGCCGACTG GGACACCTAT TGCGCGGTGC CGGGGCAGCG GAGCTGGACC
TTGATGATCT ACCTCAACCA ACCCGCCGCG GGCGGCGCGA CGCGCTTCCT TGCGACCGGC
AAGATGCACC AGCCCGAAGT CGGAAAGCTG CTCGCGTGGA ACAATGTCCG ACCCGATGGC
ACCATCAATC CCGACACGCT CCACCACGGG ATGAAGGTGC GCAAGGGGCG CAAATATATC
ATCACCAAAT GGTTCCGCGA ACGGCCCTGG CCGTGGGCAG CGGGGGAGCT GGAATAA
|
|---|
| Protein sequence | MASSGADRTA ARLAAVPGIR RAPTSRLEQF MLPRFLDAET CAALIDLIDS DARPSTIADA
NGDAAFRTSS TCDLDHRLPI VIAVNNKLHD LTGIPLAYGE PLQGQRYDIG EEFKAHTDYF
DPHGADWDTY CAVPGQRSWT LMIYLNQPAA GGATRFLATG KMHQPEVGKL LAWNNVRPDG
TINPDTLHHG MKVRKGRKYI ITKWFRERPW PWAAGELE
|
|---|
| |