| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1519 |
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| Symbol | |
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| ID | 4080032 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1584962 |
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| End bp | 1585693 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009886 |
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| Product | heme exporter protein CcmC |
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| Protein accession | YP_616565 |
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| Protein GI | 103487004 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
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| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.877247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACGCCT ATGCCAATCC GACCCGTTTT CTGGCGATTG CCAGGCCGCT GACGCCTTGG
CTGCTCGGCC TCGGGCTGGT GTTCGTGCTC GGCGGCGCCC TGGCGGGACT GACGATGGTC
CCCGGCGATT ACAAGCAGGG TGAAACCGCG CGTATCCTTT ATGTTCATGT GCCGTCGGCG
TGGCTCGGCA TGGGCGGATG GACATCGCTG GCGATCGCGG GGCTTGTCCA GCTTGTGTGG
CGGCATCCGC TGGCGGGTAT CGCCGCGCGC GCGGTTGCGG TGCCGGGGAT GCTGTTCACC
GTGCTCTGTC TGGCCACCGG ATCGATCTGG GGCAAGCCGA CCTGGGGAAC CTGGTGGGAA
TGGGACGGGC GGATGACCTC GATGCTCGTC CTGCTGTTCC TTTATGCGGG CTTCATCGCG
CTGACGAACG GCGATGATGC GCAGCGGCAG GGCGGATCGC TGTCGCGCGG CGCGGCGATC
TATGCGCTGG TCGGCGCGGT CAACATCCCG ATCATCAACC GCAGCGTCGT GTGGTGGAAC
AGCCTGCACC AGGGACCGAG CATCACCCTT GGCGGATCGA GCATCGACGG CGCGCTGCTG
TGGCCGTTGG GCTTGACCTT GCTGGGTTTT TCGCTGCTAT TCGGAGCGAT CGTGCTGATG
CGGATGCGGC GGATCATCGC CGACAACCGC GTCGCGGCGC GGCTGCGGCG CTTGGCCGAC
GAGGAGGGGT GA
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| Protein sequence | MHAYANPTRF LAIARPLTPW LLGLGLVFVL GGALAGLTMV PGDYKQGETA RILYVHVPSA
WLGMGGWTSL AIAGLVQLVW RHPLAGIAAR AVAVPGMLFT VLCLATGSIW GKPTWGTWWE
WDGRMTSMLV LLFLYAGFIA LTNGDDAQRQ GGSLSRGAAI YALVGAVNIP IINRSVVWWN
SLHQGPSITL GGSSIDGALL WPLGLTLLGF SLLFGAIVLM RMRRIIADNR VAARLRRLAD
EEG
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