Gene Sala_1514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1514 
Symbol 
ID4080027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1581309 
End bp1581740 
Gene Length432 bp 
Protein Length143 aa 
Translation table11 
GC content66% 
IMG OID638009881 
Productcytochrome C biogenesis protein 
Protein accessionYP_616560 
Protein GI103486999 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.730771 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGC GGGTGGCTCT CCTTTGCCTG CTCGGCGCGC TGGTCTTGCC GGTAGCGGCG 
CAGGACCGGC TGCCGCCCGC GCCCTATGCC TATCAGCAGC TTAATGACCC TGCGAAGGAA
GCGCGTGCCA AGGCTTTGAT GGAAGAACTG CGCTGTCTGG TCTGTCAGGG CCAGTCGATT
GCCGATTCTG ATGCGCCGCT GGCGGGCGAC ATGCGGCACG AGGTGCGCAG CAAGATCGCG
GCGGGCGAAA GCCCGGACGA GATCAAGGCG TGGCTCGTCG CGCGTTATGG AAATTGGGTG
ACTTATGATC CGCCGTTCGA CGGTGCGACA GCGCTGTTGT GGCTGGGGCC GCTGTTGTTC
CTCGCGATCG GCGGCTGGCT GGCGTTCGGC CGCTTTCGCC GCGGCGGTGA CGAGGAGGAG
GACAAGACGT GA
 
Protein sequence
MSVRVALLCL LGALVLPVAA QDRLPPAPYA YQQLNDPAKE ARAKALMEEL RCLVCQGQSI 
ADSDAPLAGD MRHEVRSKIA AGESPDEIKA WLVARYGNWV TYDPPFDGAT ALLWLGPLLF
LAIGGWLAFG RFRRGGDEEE DKT