| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1513 |
|---|
| Symbol | |
|---|
| ID | 4080026 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1580638 |
|---|
| End bp | 1581312 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 638009880 |
|---|
| Product | cytochrome c biogenesis factor |
|---|
| Protein accession | YP_616559 |
|---|
| Protein GI | 103486998 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG4235] Cytochrome c biogenesis factor |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.774249 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGTGGT TCTGGGTCAT GGTCGCCGCC GCGCTGACGA TCGGCGGTAT TTTCTGGTTG
GGTCGCTTGC CCGCCGCCGC CCGGCCGCTG GCCGGTGCCG CGGTGATGCT GGGGCTGGCG
GGCTATGCGC TTCAGGGCAG CCCGTCGCTG CCGGGCAAGC CCGTCGCGCC GGCGCCGGAA
CCCGACGGCT TTGGCGAGGC GTTGACCGAC GAGCGGCAGG GGATGGCCGA ACGCTTTGGT
CCGGCGGCCC AATGGCTCGG CATGTCCGAC GGTTTTGCGC GCACGGGCAA GACCGAACTG
GCGGCGAAGA CGCTCGAAAA GGGGCTGGAA AAATATCCCG ACAATGTCGA CCTGTGGGTG
GGGCTGGGCA ATGCGCTCGC GGCGCATGGC GGCGGCATGA TGTCGCCCGC CGCCGCGCTC
GCCTTCGACG AAGCGGCGCG GCGCGATCCG TCGCACCCGG CGCCGCCCTT CTTCGCGGGC
CTCGCGCTCG CGCAGGGCGG TGACCTTAAA GGCGCCGAAG CGGTGTGGAG CGAACTGCTC
GCGCGCAGCC CCGCCGATGC GCCCTGGCGC GCCGACCTCG AAATGCGGCT CGCGCAGCTT
CGGCAGGCGC TGGGGCCGAC GCCAGCGGCA CCTGCGGGCC CGGCCGACGA AACCGTAGCG
AGCGTCCCGA ATTGA
|
|---|
| Protein sequence | MTWFWVMVAA ALTIGGIFWL GRLPAAARPL AGAAVMLGLA GYALQGSPSL PGKPVAPAPE
PDGFGEALTD ERQGMAERFG PAAQWLGMSD GFARTGKTEL AAKTLEKGLE KYPDNVDLWV
GLGNALAAHG GGMMSPAAAL AFDEAARRDP SHPAPPFFAG LALAQGGDLK GAEAVWSELL
ARSPADAPWR ADLEMRLAQL RQALGPTPAA PAGPADETVA SVPN
|
|---|
| |