Gene Sala_1505 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1505 
Symbol 
ID4081183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1567926 
End bp1568312 
Gene Length387 bp 
Protein Length128 aa 
Translation table11 
GC content64% 
IMG OID638009872 
Productcytochrome C oxidase subunit IV 
Protein accessionYP_616551 
Protein GI103486990 
COG category[C] Energy production and conversion 
COG ID[COG3125] Heme/copper-type cytochrome/quinol oxidase, subunit 4 
TIGRFAM ID[TIGR02847] cytochrome o ubiquinol oxidase subunit IV 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.104323 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.347157 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG ACCCCCACGC CGCGCACGGT CATGGCGAGA TCGAGATGCC GCACGCGACG 
ATGCGCGACT ATGTCATCGG TTTTGTGCTG TCGGTGATCC TGACCGCCAT CCCCTTCTGG
CTGGTGATGA CAATGCCGCT GAGCGCGGGC ACGACCGGCG CGATCATCAT GGCCTTTGCG
GTGGTGCAGA TCGTCGTCCA CATGGTCTTT TTCCTGCATA TGACGCCGAA GGCGGAGGGC
GGCTGGTCGC TGACCTCGCT CGTCTTTACC GTCATCGTCG TCGTCATCAT GCTCGCGGGG
TCGCTGTGGG TGATGCACCA CCTCAACACC AACATGATGC CGATGCCGCA CGAACCGACG
AGCCGGCTCG AGAGCCGGGC GCCGTGA
 
Protein sequence
MSADPHAAHG HGEIEMPHAT MRDYVIGFVL SVILTAIPFW LVMTMPLSAG TTGAIIMAFA 
VVQIVVHMVF FLHMTPKAEG GWSLTSLVFT VIVVVIMLAG SLWVMHHLNT NMMPMPHEPT
SRLESRAP