Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1503 |
Symbol | |
ID | 4081181 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1565921 |
End bp | 1567228 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638009870 |
Product | periplasmic sensor signal transduction histidine kinase |
Protein accession | YP_616549 |
Protein GI | 103486988 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0642] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.203447 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.417793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCGACC TTTCGATCCT GCCGCCGGCG CCCAGCACGG CGCCCGCCGG CCGCCGCAAC ATGGCGCTGC TGATCCAGCT GCGCTGGCTC GCGGTGGGCG GGCAGCTGGC GACGATCGGC ATCGTCAGCG GACCGATGGG CATTTCGCTC GAGCGTGCGC CGCTGCTCGG CGCGATCCTC GTGCTCATCG CGATCAACCT CGCCAGCGCC GCCCTGCTGC GCCGCGGCCG CGCGGTGACC AATGCCGAAC TGACCGCGGC GCTGCTCTTC GATGTCGCCG CGCTTGGCTG GCAGCTCCAC CATAGCGGCG GCCTCGCCAA TCCCTTCGCG TCGCTGTTCC TGCTGCAAGT CGTGATCGGC GCGATCCTGC TCACCCCGCG CTCATCCTGG GCGATCGTGG TCGCCGCGTT GATTGCCCTC GCGGCGCTCC GCATCGACCC GACGCCGCTC GTGCTGCCGC CCGCCTATGC CGCTGATCCG ATGGGACTGT ATCTCAAGGG CAGCTTCGTC TGCTTCCTGC TGATTGCCGT CCTGCTCGTC GCCTTCGTCA CGCGGATCAG CCGCAATCTG CGCGACAGCG ACGCGGCGCT CGCGGCGAGC CGCCAGCGCG CGGCGGAGGA GGATCATATC GTGCGCATGG GGCTGCTCGC CTCGGGCGCG GCGCATGAGC TTGGCACGCC GCTCTCGACC CTGTCGGTGC TGATCGGCGA CTGGAAAGCC GCGGCGCGGC TGGAGGACGA CCGCGAATTG CAGGAGGATC TGGCCGATAT GGACGCGGCG GTGCAGCGAT GCAAGGCGAT CGTCAGCGGC ATTTTGATGT CAGCGGGCGA GGCGCGCGGC GAGGCGCCGC AACTTACCAC GATGCGCGCG GCGTTCGGCG AGATCGTTGC CCACGCGCGC GCGGCGCGCC GCCCCGACAC GCTGGAGTTT CACGACCGCT TTGGCGCCGA TGTCGCCATC GTCTCCGACC CCGCGTTGCG GCAGGTGATC GGCAATGTGC TCGACAATGC CGCCGAAGTG TCGCCGGGCT GGACCAGCTT CACCGCGTCG CGCGATGGCG AGATGCTGGT GATCGAAATC GCCGACCGCG GCCCCGGTTT CAGCGACGAG ATGATCGACG GGTTCGGCCA GCCCTATCGC TCGACCAAGG GGCGCCCCGG CGGCGGGCTG GGGTTGTTCC TGCTCGTCAA TGTGCTGCGC AAGCTGGGCG GCGGGGCCAC GGTCGCCAAC CGCGACGAAG GCGGGGCGCT CGTGCGGATA TGGCTGCCGA TCGCGGCGCT CGCGCGGCTG GGTGGAGGAA CGGCATGA
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Protein sequence | MTDLSILPPA PSTAPAGRRN MALLIQLRWL AVGGQLATIG IVSGPMGISL ERAPLLGAIL VLIAINLASA ALLRRGRAVT NAELTAALLF DVAALGWQLH HSGGLANPFA SLFLLQVVIG AILLTPRSSW AIVVAALIAL AALRIDPTPL VLPPAYAADP MGLYLKGSFV CFLLIAVLLV AFVTRISRNL RDSDAALAAS RQRAAEEDHI VRMGLLASGA AHELGTPLST LSVLIGDWKA AARLEDDREL QEDLADMDAA VQRCKAIVSG ILMSAGEARG EAPQLTTMRA AFGEIVAHAR AARRPDTLEF HDRFGADVAI VSDPALRQVI GNVLDNAAEV SPGWTSFTAS RDGEMLVIEI ADRGPGFSDE MIDGFGQPYR STKGRPGGGL GLFLLVNVLR KLGGGATVAN RDEGGALVRI WLPIAALARL GGGTA
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