Gene Sala_1496 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_1496 
Symbol 
ID4081173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp1559770 
End bp1560048 
Gene Length279 bp 
Protein Length92 aa 
Translation table11 
GC content61% 
IMG OID638009862 
Producthistone-like DNA-binding protein 
Protein accessionYP_616542 
Protein GI103486981 
COG category[L] Replication, recombination and repair 
COG ID[COG0776] Bacterial nucleoid DNA-binding protein 
TIGRFAM ID[TIGR00988] integration host factor, beta subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.963172 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.198293 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGT CAGAACTGGT TCAGAAGATC GCGAACGAAA ACAGCGATTT GCGGGTCGAA 
GAGGTCGAAC GCATTGTCGA CACTTTTTTC GATTCCATCG TCGATCAGCT CGCGACGGGG
GGCCGCGTCG AACTGCGCGG CTTTGGCGCT TTCTCGACCC GCGCGCGCGA GTCGCGCACC
GGTCGCAATC CGCGCACCGG CGCCGCGGTC GAGGTGAAGG CCAAGAAAGT GCCCTATTTC
AAACCCGGAA AGGAAATGCG CGAGCGGCTG AACAGCTGA
 
Protein sequence
MIRSELVQKI ANENSDLRVE EVERIVDTFF DSIVDQLATG GRVELRGFGA FSTRARESRT 
GRNPRTGAAV EVKAKKVPYF KPGKEMRERL NS